Alex L. Kolodkin

Solomon H. Snyder Department of Neuroscience, The Johns Hopkins University School of Medicine

Affiliated withThe Johns Hopkins University School of Medicine

Research Area

Biography

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 1	2024

Other Publications

Article	Year
Genetic access to neurons in the accessory optic system reveals a role for Sema6A in midbrain circuitry mediating motion perception. The Journal of comparative neurology\| PubMed ID: 30076594	2019
Characterization of neuropilin-1 structural features that confer binding to semaphorin 3A and vascular endothelial growth factor 165. The Journal of biological chemistry\| PubMed ID: 11886873	2002
Neuropilin-2 mediates axonal fasciculation, zonal segregation, but not axonal convergence, of primary accessory olfactory neurons. Neuron\| PubMed ID: 11906695	2002
MICALs, a family of conserved flavoprotein oxidoreductases, function in plexin-mediated axonal repulsion. Cell\| PubMed ID: 12110185	2002
Semaphorin junction: making tracks toward neural connectivity. Current opinion in neurobiology\| PubMed ID: 12593985	2003
Signaling at the growth cone: ligand-receptor complexes and the control of axon growth and guidance. Annual review of neuroscience\| PubMed ID: 12677003	2003
Neuropilin-1 conveys semaphorin and VEGF signaling during neural and cardiovascular development. Developmental cell\| PubMed ID: 12852851	2003
Semaphorin 7A promotes axon outgrowth through integrins and MAPKs. Nature\| PubMed ID: 12879062	2003
The Drosophila receptor guanylyl cyclase Gyc76C is required for semaphorin-1a-plexin A-mediated axonal repulsion. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 15282266	2004
Differential requirements for semaphorin 3F and Slit-1 in axonal targeting, fasciculation, and segregation of olfactory sensory neuron projections. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 15483127	2004
Vascular endothelial growth factor controls neuronal migration and cooperates with Sema3A to pattern distinct compartments of the facial nerve. Genes & development\| PubMed ID: 15545635	2004
MICAL flavoprotein monooxygenases: expression during neural development and following spinal cord injuries in the rat. Molecular and cellular neurosciences\| PubMed ID: 16230022	2006
High-resolution structure of the catalytic region of MICAL (molecule interacting with CasL), a multidomain flavoenzyme-signaling molecule. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 16275925	2005
Distinct roles for secreted semaphorin signaling in spinal motor axon guidance. Neuron\| PubMed ID: 16364899	2005
Drosophila Plexin B is a Sema-2a receptor required for axon guidance. Development (Cambridge, England)\| PubMed ID: 16672342	2006
Descrambling Dscam diversity. Cell\| PubMed ID: 16678085	2006
Semaphorin regulation of cellular morphology. Annual review of cell and developmental biology\| PubMed ID: 17539753	2007
Expression patterns of semaphorin7A and plexinC1 during rat neural development suggest roles in axon guidance and neuronal migration. BMC developmental biology\| PubMed ID: 17727705	2007
Semaphorin 3F is a bifunctional guidance cue for dopaminergic axons and controls their fasciculation, channeling, rostral growth, and intracortical targeting. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 19812329	2009
Secreted semaphorins control spine distribution and morphogenesis in the postnatal CNS. Nature\| PubMed ID: 20010807	2009
Transmembrane semaphorin signalling controls laminar stratification in the mammalian retina. Nature\| PubMed ID: 21270798	2011
A combinatorial semaphorin code instructs the initial steps of sensory circuit assembly in the Drosophila CNS. Neuron\| PubMed ID: 21521614	2011
Class 5 transmembrane semaphorins control selective Mammalian retinal lamination and function. Neuron\| PubMed ID: 21835343	2011
Guidance-cue control of horizontal cell morphology, lamination, and synapse formation in the mammalian outer retina. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 22593055	2012
Autism spectrum disorder susceptibility gene TAOK2 affects basal dendrite formation in the neocortex. Nature neuroscience\| PubMed ID: 22683681	2012
The RacGAP Î²2-Chimaerin selectively mediates axonal pruning in the hippocampus. Cell\| PubMed ID: 22726444	2012
The extracellular matrix proteoglycan perlecan facilitates transmembrane semaphorin-mediated repulsive guidance. Genes & development\| PubMed ID: 23028146	2012
The Control of semaphorin-1a-mediated reverse signaling by opposing pebble and RhoGAPp190 functions in drosophila. Neuron\| PubMed ID: 23177958	2012
The coordinate regulation of sensory afferent CNS targeting and CNS longitudinal tract organization in Drosophila during neural development. Journal of the peripheral nervous system : JPNS\| PubMed ID: 23279430	2012
Cbl-associated protein regulates assembly and function of two tension-sensing structures in Drosophila. Development (Cambridge, England)\| PubMed ID: 23293294	2013
SnapShot: Axon guidance II. Cell\| PubMed ID: 23622251	2013
Sema6B, Sema6C, and Sema6D expression and function during mammalian retinal development. PloS one\| PubMed ID: 23646199	2013
On and off retinal circuit assembly by divergent molecular mechanisms. Science (New York, N.Y.)\| PubMed ID: 24179230	2013
Function of the Drosophila receptor guanylyl cyclase Gyc76C in PlexA-mediated motor axon guidance. Development (Cambridge, England)\| PubMed ID: 24284209	2014
Cas adaptor proteins organize the retinal ganglion cell layer downstream of integrin signaling. Neuron\| PubMed ID: 24559672	2014
Semaphorins and the dynamic regulation of synapse assembly, refinement, and function. Current opinion in neurobiology\| PubMed ID: 24598309	2014
Functional assembly of accessory optic system circuitry critical for compensatory eye movements. Neuron\| PubMed ID: 25959730	2015
Axon Dynamics during Neocortical Laminar Innervation. Cell reports\| PubMed ID: 26146079	2015
Sculpting neural circuits by axon and dendrite pruning. Annual review of cell and developmental biology\| PubMed ID: 26436703	2015
Wiring visual systems: common and divergent mechanisms and principles. Current opinion in neurobiology\| PubMed ID: 28064004	2017
Establishing Wiring Specificity in Visual System Circuits: From the Retina to the Brain. Annual review of neuroscience\| PubMed ID: 28460185	2017
Netrin-Mediated Axon Guidance to the CNS Midline Revisited. Neuron\| PubMed ID: 28521119	2017
The laminar organization of the ellipsoid body is semaphorin-dependent and prevents the formation of ectopic synaptic connections. eLife\| PubMed ID: 28632130	2017
Varicose and cheerio collaborate with pebble to mediate semaphorin-1a reverse signaling in . Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 28894005	2017
Neuropilin-2/PlexinA3 Receptors Associate with GluA1 and Mediate Sema3F-Dependent Homeostatic Scaling in Cortical Neurons. Neuron\| PubMed ID: 29154130	2017
Editorial Overview: Developmental neuroscience (2018). Current opinion in neurobiology\| PubMed ID: 30449415	2018
Semaphorin 2b Regulates Sleep-Circuit Formation in the Drosophila Central Brain. Neuron\| PubMed ID: 31564592	2019
Binary Fate Choice between Closely Related Interneuronal Types Is Determined by a Fezf1-Dependent Postmitotic Transcriptional Switch. Neuron\| PubMed ID: 31812516	2020
Repurposing developmental mechanisms in the adult nervous system. Current opinion in genetics & development\| PubMed ID: 32485480	2020
Revisiting and refining roles of neural guidance cues in circuit assembly. Current opinion in neurobiology\| PubMed ID: 32823181	2021
Development of the vertebrate retinal direction-selective circuit. Developmental biology\| PubMed ID: 34118273	2021
Central nervous system regeneration. Cell\| PubMed ID: 34995518	2022
Characterization of non-alpha retinal ganglion cell injury responses reveals a possible block to restoring ipRGC function. Experimental neurology\| PubMed ID: 35870522	2022
The transcription factor Tbx5 regulates direction-selective retinal ganglion cell development and image stabilization. Current biology : CB\| PubMed ID: 35998637	2022
Circuit engineering: Rewiring adult outer retina connections. Current biology : CB\| PubMed ID: 36413972	2022
Corrigendum to "Characterization of non-alpha retinal ganglion cell injury responses reveals a possible block to restoring ipRGC function". Experimental neurology\| PubMed ID: 36457222	2023
Palmitoylation regulates neuropilin-2 localization and function in cortical neurons and conveys specificity to semaphorin signaling via palmitoyl acyltransferases. eLife\| PubMed ID: 37010951	2023
Retinal ganglion cell repopulation for vision restoration in optic neuropathy: a roadmap from the RReSTORe Consortium. Molecular neurodegeneration\| PubMed ID: 37735444	2023
Drebrin Regulates Collateral Axon Branching in Cortical Layer II/III Somatosensory Neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 37798130	2023
Teneurin-3 regulates the generation of non-image-forming visual circuitry and responsiveness to light in the suprachiasmatic nucleus. PLoS biology\| PubMed ID: 38048352	2023
Microtubule-binding protein MAP1B regulates interstitial axon branching of cortical neurons via the tubulin tyrosination cycle. The EMBO journal\| PubMed ID: 38388748	2024
Mef2c Controls Postnatal Callosal Axon Targeting by Regulating Sensitivity to Ephrin Repulsion. bioRxiv : the preprint server for biology\| PubMed ID: 39896513	2025
Mef2c Controls Postnatal Callosal Axon Targeting by Regulating Sensitivity to Ephrin Repulsion. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 40228894	2025