Francisco A. Cubillos

Facultad de Química y Biología, Universidad de Santiago de Chile

Affiliated withUniversidad de Santiago de Chile ANID-Millennium Science Initiative-Millennium Institute for Integrative Biology (iBio)ANID-Millennium Nucleus of Patagonian Limit of Life (LiLi)

Research Area

Genetics

Biography

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title	2025

Other Publications

Article	Year
The evolution, evolvability and engineering of gene regulatory DNA. Nature\| PubMed ID: 35264797	2022
Self-fertilization is the main sexual reproduction mechanism in native wine yeast populations. FEMS microbiology ecology\| PubMed ID: 19016866	2009
The Genetic Basis of Natural Variation in Oenological Traits in Saccharomyces cerevisiae. PloS one\| PubMed ID: 23185390	2012
High-resolution mapping of complex traits with a four-parent advanced intercross yeast population. Genetics\| PubMed ID: 24037264	2013
Mapping genetic variants underlying differences in the central nitrogen metabolism in fermenter yeasts. PloS one\| PubMed ID: 24466135	2014
Extensive cis-regulatory variation robust to environmental perturbation in Arabidopsis. The Plant cell\| PubMed ID: 25428981	2014
Natural variation in non-coding regions underlying phenotypic diversity in budding yeast. Scientific reports\| PubMed ID: 26898953	2016
RIM15 antagonistic pleiotropy is responsible for differences in fermentation and stress response kinetics in budding yeast. FEMS yeast research\| PubMed ID: 26945894	2016
Exploiting budding yeast natural variation for industrial processes. Current genetics\| PubMed ID: 27085523	2016
Natural gene expression variation studies in yeast. Yeast (Chichester, England)\| PubMed ID: 27668700	2017
Identification of Nitrogen Consumption Genetic Variants in Yeast Through QTL Mapping and Bulk Segregant RNA-Seq Analyses. G3 (Bethesda, Md.)\| PubMed ID: 28592651	2017
Genomics Perspectives on Metabolism, Survival Strategies, and Biotechnological Applications of Brettanomyces bruxellensis LAMAP2480. Journal of molecular microbiology and biotechnology\| PubMed ID: 28595177	2017
Genetic basis of mycotoxin susceptibility differences between budding yeast isolates. Scientific reports\| PubMed ID: 28835621	2017
Adaptability of the Saccharomyces cerevisiae yeasts to wine fermentation conditions relies on their strong ability to consume nitrogen. PloS one\| PubMed ID: 29432462	2018
and Natural Variants Underlie Glycerol Yield Differences in Wine Fermentation. Frontiers in microbiology\| PubMed ID: 30018610	2018
Bioprospecting for brewers: Exploiting natural diversity for naturally diverse beers. Yeast (Chichester, England)\| PubMed ID: 30698853	2019
Distinct Transcriptional Changes in Response to Patulin Underlie Toxin Biosorption Differences in . Toxins\| PubMed ID: 31295862	2019
Genetic variants of TORC1 signaling pathway affect nitrogen consumption in Saccharomyces cerevisiae during alcoholic fermentation. PloS one\| PubMed ID: 31348805	2019
Molecular profiling of beer wort fermentation diversity across natural Saccharomyces eubayanus isolates. Microbial biotechnology\| PubMed ID: 32096913	2020
An Out-of-Patagonia migration explains the worldwide diversity and distribution of Saccharomyces eubayanus lineages. PLoS genetics\| PubMed ID: 32357148	2020
Transcriptional Activity and Protein Levels of Horizontally Acquired Genes in Yeast Reveal Hallmarks of Adaptation to Fermentative Environments. Frontiers in genetics\| PubMed ID: 32425968	2020
Volatile Compound Screening Using HS-SPME-GC/MS on Strains under Low-Temperature Pilsner Wort Fermentation. Microorganisms\| PubMed ID: 32443420	2020
Fungal Diversity Analysis of Grape Musts from Central Valley-Chile and Characterization of Potential New Starter Cultures. Microorganisms\| PubMed ID: 32599933	2020
Wild Yeast for the Future: Exploring the Use of Wild Strains for Wine and Beer Fermentation. Frontiers in genetics\| PubMed ID: 33240332	2020
Rapid selection response to ethanol in Saccharomyces eubayanus emulates the domestication process under brewing conditions. Microbial biotechnology\| PubMed ID: 33755311	2022
Editorial: New Advances in Genetic Studies to Understand Yeast Adaptation to Extreme and Fermentative Environments. Frontiers in genetics\| PubMed ID: 33777115	2021
Identification of new ethanol-tolerant yeast strains with fermentation potential from central Patagonia. Yeast (Chichester, England)\| PubMed ID: 34406697	2022
Uncovering Divergence in Gene Expression Regulation in the Adaptation of Yeast to Nitrogen Scarcity. mSystems\| PubMed ID: 34427519	2021
Anthocyanins from Prevent Olanzapine-Induced Hepatic-Lipid Accumulation but Not Insulin Resistance in Skeletal Muscle Cells. Molecules (Basel, Switzerland)\| PubMed ID: 34684731	2021
An Open One-Step RT-qPCR for SARS-CoV-2 detection. medRxiv : the preprint server for health sciences\| PubMed ID: 34909786	2023
Yeast ecology and communities. Yeast (Chichester, England)\| PubMed ID: 35040197	2022
Genome sequencing of a predominant clonal lineage of the grain aphid Sitobion avenae. Insect biochemistry and molecular biology\| PubMed ID: 35183733	2022
A Saccharomyces eubayanus haploid resource for research studies. Scientific reports\| PubMed ID: 35396494	2022
Late Pleistocene-dated divergence between South Hemisphere populations of the non-conventional yeast L. cidri. Environmental microbiology\| PubMed ID: 35769023	2022
Genetic Background Matters: Population-Based Studies in Model Organisms for Translational Research. International journal of molecular sciences\| PubMed ID: 35886916	2022
Natural Variation in Diauxic Shift between Patagonian Strains. mSystems\| PubMed ID: 36468850	2022
Addition of Saccharomyces eubayanus to SCOBY fermentations modulates the chemical and volatile compound profiles in kombucha. Food microbiology\| PubMed ID: 37689417	2023
Modeling heterothermic fitness landscapes in a marsupial hibernator using changes in body composition. Oecologia\| PubMed ID: 37798536	2023
Domestication signatures in the non-conventional yeast . mSystems\| PubMed ID: 38085042	2024
Nakazawaea atacamensis f.a., sp. nov. a novel nonconventional fermentative ascomycetous yeast species from the Atacama Desert. Yeast (Chichester, England)\| PubMed ID: 38146767	2024
An Open One-Step RT-qPCR for SARS-CoV-2 detection. PloS one\| PubMed ID: 38271448	2024
Taxogenomic analyses of f.a, sp. nov. and f.a., sp. nov., two novel species isolated from plant substrates and insects. International journal of systematic and evolutionary microbiology\| PubMed ID: 38407127	2024
Wild Patagonian yeast improve the evolutionary potential of novel interspecific hybrid strains for lager brewing. PLoS genetics\| PubMed ID: 38900713	2024
Climate change and population persistence in a hibernating marsupial. Proceedings. Biological sciences\| PubMed ID: 38920109	2024
An integrative taxonomy approach reveals Saccharomyces chiloensis sp. nov. as a newly discovered species from Coastal Patagonia. PLoS genetics\| PubMed ID: 39241096	2024
Understanding brewing trait inheritance in Lager yeast hybrids. mSystems\| PubMed ID: 39530669	2024
Experimental Evolution and Hybridization Enhance the Fermentative Capacity of Wild Saccharomyces eubayanus Strains. FEMS yeast research\| PubMed ID: 39880790	2025
High ectomycorrhizal relative abundance during winter at the treeline. ISME communications\| PubMed ID: 39944239	2025
Optogenetic Modification of Glycerol Production in Wine Yeast. ACS synthetic biology\| PubMed ID: 39951366	2025