Kyeong Kyu Kim

Kyeong Kyu Kim

Department of Precision Medicine, Sungkyunkwan University School of Medicine

Affiliated withSungkyunkwan University School of Medicine

Research Area

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JoVE Journal Publications

ArticleTotal : 1
Year
Optimizing Sample Preparation for Cryogenic Electron Microscopy
Publication title
2025

Other Publications

Article
Year
Crystallization and preliminary X-ray studies of the protease domain of the heat-shock protein HtrA from Thermotoga maritima.

Acta crystallographica. Section D, Biological crystallography| PubMed ID: 11752803

2002
2002
2003
On the mechanism of chaperone activity of the small heat-shock protein of Methanococcus jannaschii.

Proceedings of the National Academy of Sciences of the United States of America| PubMed ID: 12817080

2003
Activation mechanism of HSP16.5 from Methanococcus jannaschii.

Biochemical and biophysical research communications| PubMed ID: 12878210

2003
Purification, crystallization and preliminary X-ray studies of ClpX from Helicobacter pylori.

Acta crystallographica. Section D, Biological crystallography| PubMed ID: 12925799

2003
Crystal structure of ClpX molecular chaperone from Helicobacter pylori.

The Journal of biological chemistry| PubMed ID: 14514695

2003
2004
Evidence that vaccinia virulence factor E3L binds to Z-DNA in vivo: Implications for development of a therapy for poxvirus infection.

Proceedings of the National Academy of Sciences of the United States of America| PubMed ID: 14757814

2004
2004
2004
2004
A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA.

Proceedings of the National Academy of Sciences of the United States of America| PubMed ID: 15448208

2004
2005
2005
Structure and function of HtrA family proteins, the key players in protein quality control.

Journal of biochemistry and molecular biology| PubMed ID: 15943900

2005
2005
Structure of inorganic pyrophosphatase from Helicobacter pylori.

Acta crystallographica. Section D, Biological crystallography| PubMed ID: 16239722

2005
2006
2006
Crystal structure of RseB and a model of its binding mode to RseA.

Proceedings of the National Academy of Sciences of the United States of America| PubMed ID: 17496148

2007
Purification, crystallization and preliminary crystallographic analysis of Est25: a ketoprofen-specific hormone-sensitive lipase.

Acta crystallographica. Section F, Structural biology and crystallization communications| PubMed ID: 17620715

2007
2008
2007
Crystallization and preliminary X-ray studies of TON_1713 from Thermococcus onnurineus NA1, a putative member of the haloacid dehalogenase superfamily.

Acta crystallographica. Section F, Structural biology and crystallization communications| PubMed ID: 18084090

2007
Crystallization and preliminary X-ray studies of SdiA from Escherichia coli.

Acta crystallographica. Section F, Structural biology and crystallization communications| PubMed ID: 18097094

2008
2008
The mechanism of temperature-induced bacterial HtrA activation.

Journal of molecular biology| PubMed ID: 18272173

2008
2008
Solution structures of RseA and its complex with RseB.

Journal of synchrotron radiation| PubMed ID: 18421143

2008
2008
2009
The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA reveals an unusual binding mode to Z-DNA.

Proceedings of the National Academy of Sciences of the United States of America| PubMed ID: 19095800

2008
2009
Crystallization and preliminary X-ray crystallographic studies of the Z-DNA-binding domain of a PKR-like kinase (PKZ) in complex with Z-DNA.

Acta crystallographica. Section F, Structural biology and crystallization communications| PubMed ID: 19255480

2009
Purification, crystallization and preliminary crystallographic analysis of Est-Y29: a novel oligomeric beta-lactamase.

Acta crystallographica. Section F, Structural biology and crystallization communications| PubMed ID: 19255492

2009
Structural and functional characterization of soluble endoglin receptor.

Biochemical and biophysical research communications| PubMed ID: 19268655

2009
2009
Enhanced SUMOylation of proteins containing a SUMO-interacting motif by SUMO-Ubc9 fusion.

Biochemical and biophysical research communications| PubMed ID: 19635459

2009
2010
2010
2010
2010
Structural basis for the negative regulation of bacterial stress response by RseB.

Protein science : a publication of the Protein Society| PubMed ID: 20512978

2010
The crystal structure Escherichia coli Spy.

Protein science : a publication of the Protein Society| PubMed ID: 20799348

2010
Structure-based development of a receptor activator of nuclear factor-kappaB ligand (RANKL) inhibitor peptide and molecular basis for osteopetrosis.

Proceedings of the National Academy of Sciences of the United States of America| PubMed ID: 21059944

2010
Solution structure of the Zbeta domain of human DNA-dependent activator of IFN-regulatory factors and its binding modes to B- and Z-DNAs.

Proceedings of the National Academy of Sciences of the United States of America| PubMed ID: 21471454

2011
Crystallization and diffraction analysis of Sm23: an SGNH-family arylesterase from Sinorhizobium meliloti 1021.

Acta crystallographica. Section F, Structural biology and crystallization communications| PubMed ID: 21543864

2011
2011
2011
Identification, crystallization and preliminary X-ray diffraction analysis of esterase A from Caulobacter crescentus CB15, a family VIII lipolytic enzyme.

Acta crystallographica. Section F, Structural biology and crystallization communications| PubMed ID: 22691788

2012
The crystal structure of the periplasmic domain of Vibrio parahaemolyticus CpxA.

Protein science : a publication of the Protein Society| PubMed ID: 22760860

2012
2012
2013
Structural and functional analyses of a bacterial homologue of hormone-sensitive lipase from a metagenomic library.

Acta crystallographica. Section D, Biological crystallography| PubMed ID: 23999296

2013
Inhibition of master transcription factors in pluripotent cells induces early stage differentiation.

Proceedings of the National Academy of Sciences of the United States of America| PubMed ID: 24434556

2014
Structural and functional characterization of an Isd-type haem-degradation enzyme from Listeria monocytogenes.

Acta crystallographica. Section D, Biological crystallography| PubMed ID: 24598731

2014
Structural insights into the molecular mechanism of Escherichia coli SdiA, a quorum-sensing receptor.

Acta crystallographica. Section D, Biological crystallography| PubMed ID: 24598739

2014
Crystallization and preliminary X-ray analysis of a highly stable novel SGNH hydrolase (Est24) from Sinorhizobium meliloti.

Acta crystallographica. Section F, Structural biology communications| PubMed ID: 24637754

2014
2014
Crystallization and preliminary X-ray analysis of a novel type of lipolytic hydrolase from Bacillus licheniformis.

Acta crystallographica. Section F, Structural biology communications| PubMed ID: 24699742

2014
Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa.

Biochemical and biophysical research communications| PubMed ID: 24704201

2014
2014
2014
2015
Structural basis for the substrate selectivity of a HAD phosphatase from Thermococcus onnurineus NA1.

Biochemical and biophysical research communications| PubMed ID: 25858319

2015
2015
Crystal structure analysis of c4763, a uropathogenic Escherichia coli-specific protein.

Acta crystallographica. Section F, Structural biology communications| PubMed ID: 26249697

2015
2015
2015
2016
2016
2016
2016
2016
2016
2016
2016
2016
2016
2016
Structural and functional study of ChuY from Escherichia coli strain CFT073.

Biochemical and biophysical research communications| PubMed ID: 27919686

2017
Characterization of a novel SGNH-type esterase from Lactobacillus plantarum.

International journal of biological macromolecules| PubMed ID: 28040493

2017
2017
2017
Small molecule-induced cellular conversion.

Chemical Society reviews| PubMed ID: 28829063

2017
2017
2018
2018
Identification and Validation of an Antivirulence Agent Targeting HlyU-Regulated Virulence in .

Frontiers in cellular and infection microbiology| PubMed ID: 29868508

2018
2018
2018
2018
2018
Modulating α-synuclein fibril formation using DNA tetrahedron nanostructures.

Biochimica et biophysica acta. General subjects| PubMed ID: 30278239

2019
2019
2018
2018
2019
Chemical-induced formation of BZ-junction with base extrusion.

Biochemical and biophysical research communications| PubMed ID: 30558789

2019
2019
2019
2019
2019
2019
Introduction to the Korean Biophysical Society (KBPS).

Biophysical reviews| PubMed ID: 31079352

2019
Z-DNA in the genome: from structure to disease.

Biophysical reviews| PubMed ID: 31119604

2019
2019
A Selective Inhibitor of Ubiquitin-Specific Protease 4 Suppresses Colorectal Cancer Progression by Regulating β-Catenin Signaling.

Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology| PubMed ID: 31251006

2019
2019
2019
2019
2019
2019
2019
2019
2019
Characterization and Immobilization of a Novel SGNH Family Esterase (SGNH1) from NCFM.

International journal of molecular sciences| PubMed ID: 31877740

2019
2020
2020
2020
2020
2021
2020
2020
2021
2020
2020
MD-TSPC4: Computational Method for Predicting the Thermal Stability of I-Motif.

International journal of molecular sciences| PubMed ID: 33374624

2020
2020
2021
2021
2021
2021
Roles of Two-Component Systems in Virulence.

International journal of molecular sciences| PubMed ID: 34830033

2021
2022
2022
2022
A quorum-based fluorescent probe for imaging pathogenic bacteria.

Journal of materials chemistry. B| PubMed ID: 35615858

2022
2023
2023
2023
Characterization of Z-DNA Using Circular Dichroism.

Methods in molecular biology (Clifton, N.J.)| PubMed ID: 36892757

2023
Binding of USP4 to cortactin enhances cell migration in HCT116 human colon cancer cells.

FASEB journal : official publication of the Federation of American Societies for Experimental Biology| PubMed ID: 37039823

2023
2023
2023
2023
Sensor histidine kinases and regulate biofilm and virulence in PA14.

Frontiers in cellular and infection microbiology| PubMed ID: 37881370

2023
2023
2024
Identification of an antivirulence agent targeting the master regulator of virulence genes in .

Frontiers in cellular and infection microbiology| PubMed ID: 38029271

2023
Structural understanding of SARS-CoV-2 virus entry to host cells.

Frontiers in molecular biosciences| PubMed ID: 38033388

2023
Cryo-EM structure of a 16.5-kDa small heat-shock protein from Methanocaldococcus jannaschii.

International journal of biological macromolecules| PubMed ID: 38103675

2024
Neuropathogenesis-on-chips for neurodegenerative diseases.

Nature communications| PubMed ID: 38472255

2024
Cryo-electron microscopy-based drug design.

Frontiers in molecular biosciences| PubMed ID: 38501110

2024
2024
2024
Corrigendum: Sensor histidine kinases and regulate biofilm and virulence in PA14.

Frontiers in cellular and infection microbiology| PubMed ID: 39479282

2024
2024
2025