Bo Liu

Department of Cell and Regenerative Biology, University of Wisconsin-Madison School of Medicine and Public Health

Affiliated withUniversity of Wisconsin-Madison School of Medicine and Public Health

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 2	2024

Other Publications

Article	Year
[Screening, identification, and antagonism assessment, of dominant bacteria in Ageratina adenophora Sprengel rhizosphere soil]. Ying yong sheng tai xue bao = The journal of applied ecology\| PubMed ID: 18333457	2007
Evaluating the microtubule cytoskeleton and its interacting proteins in monocots by mining the rice genome. Annals of botany\| PubMed ID: 19106179	2009
A sequence-based genetic linkage map as a reference for Brassica rapa pseudochromosome assembly. BMC genomics\| PubMed ID: 21569561	2011
The genome of the mesopolyploid crop species Brassica rapa. Nature genetics\| PubMed ID: 21873998	2011
BRAD, the genetics and genomics database for Brassica plants. BMC plant biology\| PubMed ID: 21995777	2011
Biased gene fractionation and dominant gene expression among the subgenomes of Brassica rapa. PloS one\| PubMed ID: 22567157	2012
Development of InDel markers for Brassica rapa based on whole-genome re-sequencing. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik\| PubMed ID: 22972202	2012
Sequencing of chloroplast genome using whole cellular DNA and solexa sequencing technology. Frontiers in plant science\| PubMed ID: 23162558	2012
Production and secretion of Lactobacillus crispatus β-galactosidase in Pichia pastoris. Protein expression and purification\| PubMed ID: 24012790	2013
Presep: predicting the propensity of a protein being secreted into the supernatant when expressed in Pichia pastoris. PloS one\| PubMed ID: 24278168	2013
Preparation and characterization of novel lipid carriers containing microalgae oil for food applications. Journal of food science\| PubMed ID: 24446860	2014
Biparental resequencing coupled with SNP genotyping of a segregating population offers insights into the landscape of recombination and fixed genomic regions in elite soybean. G3 (Bethesda, Md.)\| PubMed ID: 24476671	2014
RNA-Seq-based analysis of cold shock response in Thermoanaerobacter tengcongensis, a bacterium harboring a single cold shock protein encoding gene. PloS one\| PubMed ID: 24667527	2014
Expression profiling reveals functionally redundant multiple-copy genes related to zinc, iron and cadmium responses in Brassica rapa. The New phytologist\| PubMed ID: 24738937	2014
Anthocyanin biosynthetic genes in Brassica rapa. BMC genomics\| PubMed ID: 24893600	2014
Development of a SCAR marker for molecular detection and diagnosis of Tilletia controversa Kühn, the causal fungus of wheat dwarf bunt. World journal of microbiology & biotechnology\| PubMed ID: 25269545	2014
Mapping and analysis of a novel candidate Fusarium wilt resistance gene FOC1 in Brassica oleracea. BMC genomics\| PubMed ID: 25495687	2014
A Neutral Thermostable β-1,4-Glucanase from Humicola insolens Y1 with Potential for Applications in Various Industries. PloS one\| PubMed ID: 25909505	2015
Transcriptomic analysis of Thermoanaerobacter tengcongensis grown at different temperatures by RNA sequencing. Journal of genetics and genomics = Yi chuan xue bao\| PubMed ID: 26165500	2015
Overexpression and characterization of a novel endo-β-1,3(4)-glucanase from thermophilic fungus Humicola insolens Y1. Protein expression and purification\| PubMed ID: 26611612	2017
A transposon insertion in FLOWERING LOCUS T is associated with delayed flowering in Brassica rapa. Plant science : an international journal of experimental plant biology\| PubMed ID: 26706072	2015
Genetic Variation and Divergence of Genes Involved in Leaf Adaxial-Abaxial Polarity Establishment in Brassica rapa. Frontiers in plant science\| PubMed ID: 26904064	2016
Discovery of a rhamnose utilization pathway and rhamnose-inducible promoters in Pichia pastoris. Scientific reports\| PubMed ID: 27256707	2016
The use of T-DNA insertional mutagenesis to improve cellulase production by the thermophilic fungus Humicola insolens Y1. Scientific reports\| PubMed ID: 27506519	2016
Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea. Nature genetics\| PubMed ID: 27526322	2016
Map-based cloning of the dominant genic male sterile Ms-cd1 gene in cabbage (Brassica oleracea). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik\| PubMed ID: 27704179	2017
Brassica rapa Genome 2.0: A Reference Upgrade through Sequence Re-assembly and Gene Re-annotation. Molecular plant\| PubMed ID: 27890636	2017
C-terminal domain (CTD) phosphatase links Rho GTPase signaling to Pol II CTD phosphorylation in Arabidopsis and yeast. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 27911772	2016
Enhanced Thermostability of Glucose Oxidase through Computer-Aided Molecular Design. International journal of molecular sciences\| PubMed ID: 29385094	2018
The use of -mediated insertional mutagenesis sequencing to identify novel genes of involved in cellulase production. 3 Biotech\| PubMed ID: 29492372	2018
iTRAQ-Based Proteomic Analysis of Wheat Bunt Fungi Tilletia controversa, T. caries, and T. foetida. Current microbiology\| PubMed ID: 29693196	2018
Ancient horizontally transferred genes in the genome of California two-spot octopus, Octopus bimaculoides. Gene\| PubMed ID: 29738840	2018
Data on horizontally transferred genes in California two-spot octopus, . Data in brief\| PubMed ID: 29942828	2018
The genome of tapeworm Taenia multiceps sheds light on understanding parasitic mechanism and control of coenurosis disease. DNA research : an international journal for rapid publication of reports on genes and genomes\| PubMed ID: 29947776	2018
[Comparation and utilization of crop-omics databases]. Yi chuan = Hereditas\| PubMed ID: 30021717	2018
Expression and characterization of a pectin methylesterase from Aspergillus niger ZJ5 and its application in fruit processing. Journal of bioscience and bioengineering\| PubMed ID: 30042002	2018
The genome of the golden apple snail Pomacea canaliculata provides insight into stress tolerance and invasive adaptation. GigaScience\| PubMed ID: 30107526	2018
Decreased Rhamnose Metabolic Flux Improved Production of Target Proteins and Cell Flocculation in . Frontiers in microbiology\| PubMed ID: 30116233	2018
Site-directed mutation of β-galactosidase from to reduce galactose inhibition in lactose hydrolysis. 3 Biotech\| PubMed ID: 30333954	2018
The chicken gut metagenome and the modulatory effects of plant-derived benzylisoquinoline alkaloids. Microbiome\| PubMed ID: 30482240	2018
High Relative Parasitic Fitness of G22 Derivatives is Associated with the Epidemic Potential of Wheat Stripe Rust in China. Plant disease\| PubMed ID: 30673484	2018
Basal transcription profiles of the rhamnose-inducible promoter P and the development of efficient P-based systems for markerless gene deletion and a mutant library in Pichia pastoris. Current genetics\| PubMed ID: 30680438	2019
Production Optimization of an Active -Galactosidase of in Heterologous Expression Systems. BioMed research international\| PubMed ID: 30915359	2019
A Novel CreA-Mediated Regulation Mechanism of Cellulase Expression in the Thermophilic Fungus . International journal of molecular sciences\| PubMed ID: 31357701	2019
Genome-Wide Expression Profiling of Genes Associated with the -Mediated Wheat Resistance to Leaf Rust (). International journal of molecular sciences\| PubMed ID: 31514396	2019
A chromosome-level genome assembly of Cydia pomonella provides insights into chemical ecology and insecticide resistance. Nature communications\| PubMed ID: 31530873	2019
Genetically Modified Rabies Virus Vector-Based Rift Valley Fever Virus Vaccine is Safe and Induces Efficacious Immune Responses in Mice. Viruses\| PubMed ID: 31597372	2019
Development of ISSR-derived SCAR Marker and SYBR Green I Real-time PCR Method for Detection of Teliospores of Tilletia laevis Kühn. Scientific reports\| PubMed ID: 31776416	2019
Whole Genome Re-sequencing Reveals Natural Variation and Adaptive Evolution of . Frontiers in microbiology\| PubMed ID: 31849921	2019
A LuxR-type regulator, AcrR, regulates flagellar assembly and contributes to virulence, motility, biofilm formation, and growth ability of Acidovorax citrulli. Molecular plant pathology\| PubMed ID: 31943660	2020
Mikania micrantha genome provides insights into the molecular mechanism of rapid growth. Nature communications\| PubMed ID: 31953413	2020
Decreased expression of LRA4, a key gene involved in rhamnose metabolism, caused up-regulated expression of the genes in this pathway and autophagy in Pichia pastoris. AMB Express\| PubMed ID: 32100129	2020
Identification of Stripe Rust Resistance Genes in Common Wheat Cultivars From the Huang-Huai-Hai Region of China. Plant disease\| PubMed ID: 32293996	2020
Effects of polysaccharide from Pueraria lobata on gut microbiota in mice. International journal of biological macromolecules\| PubMed ID: 32387359	2020
Genetic structure and insecticide resistance characteristics of fall armyworm populations invading China. Molecular ecology resources\| PubMed ID: 32619331	2020
The Rhizosphere Microbiome of Provides Insight Into Adaptation and Invasion. Frontiers in microbiology\| PubMed ID: 32733410	2020
Identification of a Hyperparasitic Strain Affecting the Infection Dynamics of f. sp. on Wheat. Frontiers in microbiology\| PubMed ID: 32754121	2020
Apolygus lucorum genome provides insights into omnivorousness and mesophyll feeding. Molecular ecology resources\| PubMed ID: 32939994	2021
Giant African snail genomes provide insights into molluscan whole-genome duplication and aquatic-terrestrial transition. Molecular ecology resources\| PubMed ID: 33000522	2021
Recombinant H7 hemagglutinin expressed in glycoengineered Pichia pastoris forms nanoparticles that protect mice from challenge with H7N9 influenza virus. Vaccine\| PubMed ID: 33131935	2020
Allelic Genes Activate Rice Blight Resistance Suppressed by Interfering TAL Effectors. Plant communications\| PubMed ID: 33367250	2020
Complete chloroplast genome of Rolfe, a famous ornamental plant and traditional medicinal herb. Mitochondrial DNA. Part B, Resources\| PubMed ID: 33458178	2020
A microbial gene catalog of anaerobic digestion from full-scale biogas plants. GigaScience\| PubMed ID: 33506264	2021
Gene expression patterns of Cydia pomonella granulovirus in codling moth larvae revealed by RNAseq analysis. Virology\| PubMed ID: 33756423	2021
Transcriptomic and Functional Analyses Reveal Roles of AclR, a luxR-type Global Regular, in Regulating Motility and Virulence of . Molecular plant-microbe interactions : MPMI\| PubMed ID: 33779205	2021
Genetic transformation system for Bacillus velezensis NSZ-YBGJ001 and curing of the endogenous plasmid pBV01. Biotechnology letters\| PubMed ID: 34003400	2021
Multiplex CRISPR-Cas9 editing of DNA methyltransferases in rice uncovers a class of non-CG methylation specific for GC-rich regions. The Plant cell\| PubMed ID: 34117872	2021
Highly Efficient Temperature Inducible CRISPR-Cas9 Gene Targeting in . International journal of molecular sciences\| PubMed ID: 34201604	2021
Plant traits and soil fertility mediate productivity losses under extreme drought in C grasslands. Ecology\| PubMed ID: 34236696	2021
Wheat Rhizosphere Metagenome Reveals Newfound Potential Soil Zn-Mobilizing Bacteria Contributing to Cultivars' Variation in Grain Zn Concentration. Frontiers in microbiology\| PubMed ID: 34248914	2021
Comparative Genomics Provide Insights Into Function and Evolution of Odorant Binding Proteins in . Frontiers in physiology\| PubMed ID: 34305643	2021
β-galactosidase GALA from with high transgalactosylation activity. Bioengineered\| PubMed ID: 34606421	2021
CRISPR/Cas9-mediated genome editing directed by a 5S rRNA-tRNA hybrid promoter in the thermophilic filamentous fungus Humicola insolens. Biotechnology for biofuels\| PubMed ID: 34688310	2021
Genomic insights into longan evolution from a chromosome-level genome assembly and population genomics of longan accessions. Horticulture research\| PubMed ID: 35184175	2022
Senecavirus A as an Oncolytic Virus: Prospects, Challenges and Development Directions. Frontiers in oncology\| PubMed ID: 35371972	2022
Genomic features of the polyphagous cotton leafworm Spodoptera littoralis. BMC genomics\| PubMed ID: 35525948	2022
Patulin Detoxification by Recombinant Manganese Peroxidase from Expressed by . Toxins\| PubMed ID: 35878178	2022
Chromosome-level genome assembly and population genomic analyses provide insights into adaptive evolution of the red turpentine beetle, Dendroctonus valens. BMC biology\| PubMed ID: 36002826	2022
Detoxification of the Mycotoxin Citrinin by a Manganese Peroxidase from . Toxins\| PubMed ID: 36422974	2022
Chromosome-level genome assembly of provides insights into the biosynthesis of flavor compounds. Horticulture research\| PubMed ID: 36479578	2022
Chromosome-level genome of black cutworm provides novel insights into polyphagy and seasonal migration in insects. BMC biology\| PubMed ID: 36600240	2023
A vein wall cell atlas of murine venous thrombosis determined by single-cell RNA sequencing. Communications biology\| PubMed ID: 36721040	2023
A chromosome-level genome assembly of the beet armyworm Spodoptera exigua. Genomics\| PubMed ID: 36746219	2023
Pangenomic analysis of provides insight into the evolution of host adaptation and cytoplasmic incompatibility factor genes. Frontiers in microbiology\| PubMed ID: 36819029	2023
Therapeutic equine hyperimmune antibodies with high and broad-spectrum neutralizing activity protect rodents against SARS-CoV-2 infection. Frontiers in immunology\| PubMed ID: 36875106	2023
Inhibition of invasive plant Mikania micrantha rapid growth by host-specific rust (Puccinia spegazzinii). Plant physiology\| PubMed ID: 36974897	2023
Metabolomics and Transcriptomics Reveal the Response Mechanisms of to Infection. Microorganisms\| PubMed ID: 36985252	2023
Single-cell RNA sequencing provides novel insights to pathologic pathways in abdominal aortic aneurysm. Frontiers in cardiovascular medicine\| PubMed ID: 37288252	2023
Sweet potato () and hyacinth bean () in combination provide greater suppression of mile-a-minute () than either crop alone. Frontiers in plant science\| PubMed ID: 37324697	2023
Adaptive evolution to the natural and anthropogenic environment in a global invasive crop pest, the cotton bollworm. Innovation (Cambridge (Mass.))\| PubMed ID: 37388193	2023
The Bax inhibitor GmBI-1α interacts with a Nod factor receptor and plays a dual role in the legume-rhizobia symbiosis. Journal of experimental botany\| PubMed ID: 37470327	2023
Thrombospondin-1 in vascular development, vascular function, and vascular disease. Seminars in cell & developmental biology\| PubMed ID: 37507331	2024
Thrombosis in the pathogenesis of abdominal aortic aneurysm. JVS-vascular science\| PubMed ID: 37564632	2023
Transcriptome analysis used to identify and characterize odorant binding proteins in Agasicles hygrophila (Coleoptera: Chryspmelidae). Journal of insect science (Online)\| PubMed ID: 37804502	2023
Protein-protein interaction and site prediction using transfer learning. Briefings in bioinformatics\| PubMed ID: 37870286	2023
Genome evolution and initial breeding of the Triticeae grass dominating the Eurasian Steppe. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 37874858	2023
A Genome-Wide Analysis of Serine Protease Inhibitors in Provides Insights into Their Evolution and Expression Pattern. International journal of molecular sciences\| PubMed ID: 38003538	2023
Macrophage-mediated downregulation of lncRNA Carmn in mouse abdominal aortic aneurysm. Vascular pharmacology\| PubMed ID: 38097098	2024
Cuticular proteins in codling moth (Cydia pomonella) respond to insecticide and temperature stress. Ecotoxicology and environmental safety\| PubMed ID: 38141334	2024
Mining and rational design of psychrophilic catalases using metagenomics and deep learning models. Applied microbiology and biotechnology\| PubMed ID: 38175233	2024
Chromosome-level genome of Ambrosia trifida provides insights into adaptation and the evolution of pollen allergens. International journal of biological macromolecules\| PubMed ID: 38191104	2024