Hanchuan Peng

Allen Institute for Brain Science

Affiliated withAllen Institute for Brain Science

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 20	2013

Other Publications

Article	Year
A Bayesian morphometry algorithm. IEEE transactions on medical imaging\| PubMed ID: 15191147	2004
Minimum redundancy feature selection from microarray gene expression data. Journal of bioinformatics and computational biology\| PubMed ID: 15852500	2005
Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy. IEEE transactions on pattern analysis and machine intelligence\| PubMed ID: 16119262	2005
Mapping of microbial pathways through constrained mapping of orthologous genes. Proceedings / IEEE Computational Systems Bioinformatics Conference, CSB. IEEE Computational Systems Bioinformatics Conference\| PubMed ID: 16448029	2004
Automatic recognition and annotation of gene expression patterns of fly embryos. Bioinformatics (Oxford, England)\| PubMed ID: 17237064	2007
Phenotype clustering of breast epithelial cells in confocal images based on nuclear protein distribution analysis. BMC cell biology\| PubMed ID: 17634093	2007
Automatic image analysis for gene expression patterns of fly embryos. BMC cell biology\| PubMed ID: 17634097	2007
Straightening Caenorhabditis elegans images. Bioinformatics (Oxford, England)\| PubMed ID: 18025002	2008
Transitive closure and metric inequality of weighted graphs: detecting protein interaction modules using cliques. International journal of data mining and bioinformatics\| PubMed ID: 18399069	2006
Bioimage informatics: a new area of engineering biology. Bioinformatics (Oxford, England)\| PubMed ID: 18603566	2008
VANO: a volume-object image annotation system. Bioinformatics (Oxford, England)\| PubMed ID: 19189978	2009
A 3D digital atlas of C. elegans and its application to single-cell analyses. Nature methods\| PubMed ID: 19684595	2009
Segmentation of center brains and optic lobes in 3D confocal images of adult fruit fly brains. Methods (San Diego, Calif.)\| PubMed ID: 19698789	2010
Imaging informatics for personalised medicine: applications and challenges. International journal of functional informatics and personalised medicine\| PubMed ID: 19862353	2009
Analysis of cell fate from single-cell gene expression profiles in C. elegans. Cell\| PubMed ID: 19879847	2009
A principal skeleton algorithm for standardizing confocal images of fruit fly nervous systems. Bioinformatics (Oxford, England)\| PubMed ID: 20172944	2010
V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets. Nature biotechnology\| PubMed ID: 20231818	2010
Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model. Bioinformatics (Oxford, England)\| PubMed ID: 20529931	2010
Automatic neuron tracing in volumetric microscopy images with anisotropic path searching. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 20879349	2010
Proof-editing is the bottleneck of 3D neuron reconstruction: the problem and solutions. Neuroinformatics\| PubMed ID: 21170608	2011
BrainAligner: 3D registration atlases of Drosophila brains. Nature methods\| PubMed ID: 21532582	2011
Automated reconstruction of neuronal morphology based on local geometrical and global structural models. Neuroinformatics\| PubMed ID: 21547564	2011
Anisotropic path searching for automatic neuron reconstruction. Medical image analysis\| PubMed ID: 21669547	2011
Automatic 3D neuron tracing using all-path pruning. Bioinformatics (Oxford, England)\| PubMed ID: 21685076	2011
Simultaneous recognition and segmentation of cells: application in C.elegans. Bioinformatics (Oxford, England)\| PubMed ID: 21849395	2011
mGRASP enables mapping mammalian synaptic connectivity with light microscopy. Nature methods\| PubMed ID: 22138823	2012
Bioimage informatics: a new category in Bioinformatics. Bioinformatics (Oxford, England)\| PubMed ID: 22399678	2012
Visualization and analysis of 3D microscopic images. PLoS computational biology\| PubMed ID: 22719236	2012
Biological imaging software tools. Nature methods\| PubMed ID: 22743775	2012
A GAL4-driver line resource for Drosophila neurobiology. Cell reports\| PubMed ID: 23063364	2012
Eight pairs of descending visual neurons in the dragonfly give wing motor centers accurate population vector of prey direction. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 23213224	2013
A distance-field based automatic neuron tracing method. BMC bioinformatics\| PubMed ID: 23497429	2013
Clonal development and organization of the adult Drosophila central brain. Current biology : CB\| PubMed ID: 23541733	2013
APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree. Bioinformatics (Oxford, England)\| PubMed ID: 23603332	2013
Automated cellular annotation for high-resolution images of adult Caenorhabditis elegans. Bioinformatics (Oxford, England)\| PubMed ID: 23812982	2013
BIOCAT: a pattern recognition platform for customizable biological image classification and annotation. BMC bioinformatics\| PubMed ID: 24090164	2013
Automated image computing reshapes computational neuroscience. BMC bioinformatics\| PubMed ID: 24090217	2013