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The filtration membrane consists of three distinct layers. The fenestrated endothelial cells of glomerular capillaries form the first layer, permeable to almost all solutes. The basement membrane, composed of collagen fibers and negatively charged glycoproteins, forms the second layer. Filtration slits on podocytes create the third layer, preventing passage of large molecules.

Fenestrations are large pores in the endothelial cells lining glomerular capillaries that allow all solutes in blood plasma to pass through while preventing filtration of blood cells. This selective permeability ensures cellular components remain in circulation while permitting water and small solutes to enter the filtrate.

The basement membrane contains negatively charged glycoproteins that repel plasma proteins, which are also negatively charged. This charge-based filtration mechanism prevents most plasma proteins from passing through, while allowing water and small solutes to cross. The membrane's pores and charge work together for selective permeability.

Filtration slits permit passage of molecules smaller than 0.006–0.007 micrometers in diameter. These include water, glucose, vitamins, amino acids, very small plasma proteins, ammonia, urea, and ions. Larger molecules and blood cells are blocked by the slit membrane, preventing their loss from circulation.

Podocytes are specialized cells with footlike extensions called pedicels that wrap around glomerular capillaries. The spaces between pedicels, called filtration slits, are covered by thin slit membranes. These slits act as the final barrier, preventing passage of large molecules while allowing smaller substances to form the glomerular filtrate.

The filtration membrane's three-layer design ensures selective permeability through both physical and charge-based mechanisms. Fenestrations allow solute passage, the negatively charged basement membrane repels proteins, and filtration slits block large molecules. This combination enables efficient waste removal while retaining essential proteins and blood cells in circulation.

Glomerular filtration produces the initial glomerular filtrate containing water, small solutes, glucose, and urea. Subsequent tubular reabsorption and secretion processes modify this filtrate as it moves through the renal tubule, selectively reabsorbing useful substances and secreting additional wastes to form final urine.