Hydrogen Bonding

Hydrogen bonding is a noncovalent attraction between a hydrogen atom covalently attached to an electronegative atom and another electronegative atom with available lone-pair electrons. In biology, differences in electronegativity create partial charges that allow these interactions to form, strengthen cooperatively, and break under changing conditions such as temperature, pH, or solvent composition. Hydrogen bonds stabilize DNA by linking complementary base pairs and help maintain the three-dimensional structures of proteins, carbohydrates, and other biomolecules. They also give water distinctive properties, including cohesion and solvent behavior, making hydrogen bonding central to molecular recognition, biochemical reactions, and the organization of living systems.

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JoVE Core - Anatomy and Physiology

Hydrogen Bonds

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2025

A hydrogen bond is formed when a weakly positive hydrogen atom already bonded to one electronegative atom (for example, the oxygen in the water molecule) is attracted to another electronegative atom from another polar molecule, such as water (H2O), hydrogen fluoride (HF), or ammonia (NH3). The huge electronegativity difference between the H atom (2.1) and the atom to which it is bonded (4.0 for an F atom, 3.5 for an O atom, or 3.0 for an N atom), combined with the very small size of an H atom...

Hydrogen Bonds

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2026

Hydrogen BondsHydrogen bonds are weak attractions between atoms that have formed other chemical bonds. One of these atoms is electronegative, like oxygen, and has a partial negative charge. The other is a hydrogen atom that has bonded with another electronegative atom and has a partial positive charge.Hydrogen Bonds Control the World!Because hydrogen has very weak electronegativity when it binds with a strongly electronegative atom, such as oxygen or nitrogen, electrons in the bond are...

IR Spectrum Peak Broadening: Hydrogen Bonding

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2024

The vibrational frequency of a bond is directly proportional to its bond strength. As a result, stronger bonds vibrate at higher frequencies, while weaker bonds vibrate at lower frequencies. The stretching vibration of the strong O–H bond in alcohols and phenols (very dilute solution or gas phase) appears as a sharp peak at 3600–3650 cm−1. However, the extent of hydrogen bonding influences the observed stretching frequency and band broadening. Intermolecular or intramolecular hydrogen bonding...

Hydrogenation

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2023

Source: Vy M. Dong and Zhiwei Chen, Department of Chemistry, University of California, Irvine, CA This experiment will demonstrate the hydrogenation of chalcone as an example of an alkene hydrogenation reaction (Figure 1). In this experiment, palladium on carbon (Pd/C) will be used as a heterogeneous catalyst for the process. A balloon will be used to supply the hydrogen atmosphere. Figure 1: Diagram showing the hydrogenation of chalcone to 3-phenylpropiophenone.

Valence Bond Theory

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2020

Overview of Valence Bond Theory Valence bond theory describes a covalent bond as the overlap of half-filled atomic orbitals (each containing a single electron) that yield a pair of electrons shared between the two bonded atoms. The orbitals on two different atoms overlap when a portion of one orbital and a portion of a second orbital occupy the same region of space. According to valence bond theory, a covalent bond results when two conditions are met: (1) an orbital on one atom overlaps an...

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