Selected Reaction Monitoring

Selected Reaction Monitoring is a targeted mass spectrometry method used to detect and quantify specific chemical compounds with high selectivity and sensitivity. In tandem mass spectrometry, a precursor ion is isolated, fragmented by collision-induced dissociation, and monitored through one or more characteristic product-ion transitions, often using a triple-quadrupole instrument. By focusing on defined precursor-to-product ion pairs, the method distinguishes target analytes from complex sample components and supports accurate quantitative analysis. Selected Reaction Monitoring is widely applied in analytical chemistry, pharmaceutical research, environmental testing, and biological studies to measure trace compounds, verify molecular identity, and assess changes in sample composition.

Selected Reaction Monitoring - Related Videos

Research

JoVE Journal - Biology

Selected Reaction Monitoring Mass Spectrometry for Absolute Protein Quantification

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Cited by 15 •

2015

This protocol describes how to perform absolute quantification assays of target proteins within complex biological samples using selected reaction monitoring. It was used to accurately quantify proteins of the mouse macrophage chemotaxis signaling pathway. Target peptide selection, assay development, and qualitative and quantitative assays are described in detail.

Research

JoVE Journal - Bioengineering
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Monitoring the Reductive and Oxidative Half-Reactions of a Flavin-Dependent Monooxygenase using Stopped-Flow Spectrophotometry

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Cited by 12 •

2012

We describe the use of a stopped-flow instrument to investigate both the reductive and oxidative half-reactions of Aspergillus fumigatus siderophore A (SidA), a flavin-dependent monooxygenase. We then show the spectra corresponding to the species in the reaction of SidA and we calculate the rate constants for their formation.

Real-time Monitoring of Reactions Performed Using Continuous-flow Processing: The Preparation of 3-Acetylcoumarin as an Example

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Cited by 6 •

2015

Real-time monitoring allows for fast optimization of reactions performed using continuous-flow processing. Here the preparation of 3-acetylcoumarin is used as an example. The apparatus for performing in-situ Raman monitoring is described, as are the steps required to optimize the reaction.

Ubiquitin Chain Analysis by Parallel Reaction Monitoring

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2020

This method describes the assessment of global changes in ubiquitin chain topology. The assessment is performed by the application of a mass spectrometry-based targeted proteomics approach.

Research

JoVE Journal - Biochemistry
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Optimization of In vitro Transcription Reaction for mRNA Production Using Chromatographic At-Line Monitoring

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Cited by 1 •

2025

Optimizing in vitro transcription (IVT) is critical for cost-effective mRNA production. This protocol details an analytical chromatographic method for at-line analysis of IVT reaction, monitoring NTP depletion and mRNA production in batch or fed-batch modes, applicable to various RNA modalities, enhancing productivity and reducing costs.

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