Microwell Aggregation

Microwell aggregation is a cell-organization technique that uses arrays of small wells to concentrate cells into uniform three-dimensional aggregates, enabling controlled studies of cell behavior and tissue development. Cells settle into individual microwells, where confinement increases cell-cell contact and adhesion, while well dimensions and seeding density influence aggregate size and composition. In developmental biology, this method supports the formation of embryoid bodies, spheroids, and early organoid structures for investigating differentiation, morphogenesis, and lineage specification. More consistent aggregates can improve experimental reproducibility and provide defined starting material for studying development, disease modeling, drug responses, and tissue engineering.

Microwell Aggregation - Related Videos

Research

JoVE Journal - Developmental Biology
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Aggregate Size Optimization in Microwells for Suspension-based Cardiac Differentiation of Human Pluripotent Stem Cells

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Cited by 11 •

2016

Conventional methods to initiate suspension aggregate based cardiac differentiation of human pluripotent stems cells (hPSCs) are plagued with culture heterogeneity with respect to aggregate size and shape. Here, we describe a robust method for cardiac differentiation employing microwells to generate size-controlled hPSC aggregates cultured under cardiac-promoting conditions.

Production of Large Numbers of Size-controlled Tumor Spheroids Using Microwell Plates

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Cited by 36 •

2013

We introduce a protocol for the generation of large numbers (thousands to hundreds of thousands) of uniform size- and composition-controlled tumor spheroids, using commercially available microwell plates.

Research

JoVE EoE - Bacterial Growth and Techniques

Photodegradable Hydrogel-Based Isolation of Bacterial Colonies in Microwell Arrays

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2025

Source: Fattahi, N., et al. Photodegradable Hydrogel Interfaces for Bacteria Screening, Selection, and Isolation. J. Vis. Exp. (2021)This video demonstrates the use of photodegradable hydrogels to isolate bacterial colonies within silicon microwell arrays. Bacterial cells are first loaded into microwells, encapsulated in a crosslinked hydrogel, and cultured into distinct colonies. Upon exposure to ultraviolet light, targeted degradation of the hydrogel enables selective extraction of individual...

Education

JoVE Science Education - Engineering

Aggregates for Concrete and Asphaltic Mixes

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2023

Source: Roberto Leon, Department of Civil and Environmental Engineering, Virginia Tech, Blacksburg, VA Concrete and asphalt are by far the most common construction materials used today. Concrete is a composite material consisting of cement, water, air, coarse aggregate, and fine aggregates. Fine aggregates are typically sands and coarse aggregates are natural or crushed rocks. Chemical admixtures to modify certain specific properties are also commonly used (i.e., superplasticizers to make the...

A Paired Bead and Magnet Array for Molding Microwells with Variable Concave Geometries

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Cited by 8 •

2018

This manuscript introduces a robust method of fabricating concave microwells without the need for complex high-cost facilities. Using magnetic force, steel beads, and a through-hole array, several hundred microwells were formed in a 3 cm x 3 cm polydimethylsiloxane (PDMS) substrate.

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