16.5: Polimorfismos de nucleótido único - SNPs (por sus siglas en inglés)

Single Nucleotide Polymorphisms-SNPs
JoVE Core
Molecular Biology
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JoVE Core Molecular Biology
Single Nucleotide Polymorphisms-SNPs

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01:05 min
April 07, 2021

Overview

A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast, the substitution of a purine with a pyrimidine (A or G/C or T) or vice versa is called a transversion. In SNPs, transitions are more prominent than transversions. 

Different methods are used to study the genetic variations present in the genome, also known as genotyping. Unlike SNPs, single tandem repeats (STRs) involve di-, tri-, or tetranucleotide repeats. Scientists often use SNPs genotyping over STRs as SNPs are more abundant and stable, and some SNPs directly affect the phenotype.

Most of the time, SNPs are found in introns, which do not code for any protein. Such SNPs can be used as biological markers to locate genes associated with a particular disease. If the SNP is present within a gene or in a regulatory sequence near the gene, it may affect its function and cause disease.

Transcript

Cuando se comparan múltiples genomas humanos, se observan variaciones en las secuencias.

Las variaciones debidas a la sustitución de un nucleótido se denominan polimorfismos de un solo nucleótido o SNP.

Las variaciones debidas a la inserción o deleción de una secuencia de nucleótidos de menos de una kilobase de longitud se denominan indel.

Si una inserción o deleción de nucleótidos se copia un número variable de veces en el mismo genoma, se denomina variación del número de copias o CNV. A menudo, las CNV involucran grandes tramos de ADN de más de una kilobase de longitud.

Un haplotipo es un conjunto de genes heredados de un solo progenitor. Un genoma se puede dividir en bloques de haplotipos que contienen grupos de polimorfismos.

Dado que se producen pocos entrecruzamientos entre cromosomas homólogos durante cada meiosis, los bloques de haplotipos se han heredado en un grupo vinculado a través de generaciones.

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