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Rilevamento di Candidatus liberibacter asiaticus distribuibile sul campo utilizzando l'a...
Rilevamento di Candidatus liberibacter asiaticus distribuibile sul campo utilizzando l'a...
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JoVE Journal Biology
Field-Deployable Candidatus Liberibacter asiaticus Detection Using Recombinase Polymerase Amplification Combined with CRISPR-Cas12a

Rilevamento di Candidatus liberibacter asiaticus distribuibile sul campo utilizzando l'amplificazione della polimerasi ricombinasi combinata con CRISPR-Cas12a

Full Text
3,215 Views
09:03 min
December 23, 2022

DOI: 10.3791/64070-v

Min Li*1, Hongkun Qin*1, Yunfei Long1, Meiqin Cheng1, Ling Li1, Aijun Huang2, Nian Wang3, Shuo Duan1

1China-USA Citrus Huanglongbing Joint Laboratory, National Navel Orange Engineering Research Center,Gannan Normal University, 2Department of Biological Sciences,Gannan Normal University, 3Citrus Research and Education Center, Department of Microbiology and Cell Science,University of Florida - Institute of Food and Agricultural Sciences

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Overview

This study addresses the need for rapid and accurate detection of Candidatus Liberibacter asiaticus (CLas), the causative agent of Huanglongbing (HLB) in citrus plants. A new method, referred to as CLas-DETECTR, combines recombinase polymerase amplification with CRISPR-Cas12a technology, allowing for portable and sensitive testing in the field.

Key Study Components

Research Area

  • Plant Pathology
  • Diagnostics in Agriculture
  • Microbial Genetics

Background

  • Huanglongbing (HLB) severely impacts citrus production globally.
  • CLas early detection is crucial for preventing disease spread.
  • Current methods like PCR have limitations, requiring improvement for field applicability.

Methods Used

  • Recombinase polymerase amplification combined with CRISPR-Cas12a
  • Field samples of citrus leaves were utilized for testing.
  • Fluorescent detection technology for result visualization.

Main Results

  • CLas-DETECTR showed significantly higher sensitivity than standard PCR.
  • Specific fluorescence was observed exclusively in CLas-positive samples.
  • The method can yield results within 90 minutes under isothermal conditions.

Conclusions

  • The study demonstrates that CLas-DETECTR is a robust and sensitive diagnostic tool for HLB.
  • This method can facilitate timely interventions to manage citrus diseases effectively.

Frequently Asked Questions

What is Huanglongbing (HLB)?
HLB is a destructive disease affecting citrus plants, caused by Candidatus Liberibacter asiaticus.
How does CLas-DETECTR work?
It combines recombinase polymerase amplification with CRISPR-Cas12a for sensitive and rapid detection of CLas.
What advantages does the CLas-DETECTR method offer?
It provides a portable, fast, and highly sensitive approach for detecting CLas in field conditions.
How long does the detection process take?
The complete testing can be performed in about 90 minutes.
What was the specificity of the method?
Only CLas-positive samples showed green fluorescence, indicating high specificity.
Can this method be used in different environmental conditions?
Yes, the isothermal condition makes it applicable in various field situations.

In questo lavoro, è stato sviluppato un metodo di rilevamento rapido, sensibile e portatile per Candidatus Liberibacter asiaticus basato sull'amplificazione della polimerasi ricombinasi combinata con CRISPR-Cas12a.

Huang long bing, abbreviato in HLB. È una malattia degli agrumi devastante in tutto il mondo. Nei paesi più produttori di agrumi, come la Cina e gli Stati Uniti, l'HLB è causata dal batterio limitato al floema Candidatus Liberibacter asiaticus, abbreviato in CLas.

La diagnosi precoce delle CLa è stata importante per i coltivatori che facilitano l'intervento precoce e prevengono la diffusione della malattia. Quindi qui abbiamo sviluppato un nuovo metodo per la diagnosi rapida e portatile di HLB, combinato con l'amplificazione della polimerasi ricombinasi e il sistema CRISPR-Cas12a. L'abbiamo chiamato CLas-DETECTR.

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