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Methodenartikel

Generation of Tilted Amygdala Slices from a Mouse Brain

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8 juli 2025

In dit artikel

Samenvatting

Source: Bosch, D., et al. Ex Vivo Optogenetic Dissection of Fear Circuits in Brain Slices. J. Vis. Exp. (2016)

The video demonstrates the generation of tilted amygdala slices from a mouse brain. The brain is positioned at an angle on the vibratome specimen stage to obtain slices containing the amygdala and axons from the medial prefrontal cortex that form synaptic connections with the amygdala. The brain slices are maintained at the physiological temperature to preserve the tissue for further experiments.

Protocol

All procedures involving sample collection have been performed in accordance with the institute's IRB guidelines.

1. Preparation of Acute Slices

  1. Prepare artificial cerebrospinal fluid (ACSF), cutting solution, tools (scissors, scalpel, forceps, spatula, Pasteur pipette), and agar blocks.
    Note: 1 L of artificial cerebrospinal fluid (ACSF) is required per experiment, and is prepared by dissolving chemicals in double-distilled H2O as previously published. The cutting solution is prepared by supplementing 200 ml of ACSF with 0.87 ml of 2 M MgSO4 stock solution.
  2. Oxygenate ACSF and cutting solution throughout the experiment with 95% O2 and 5% CO2.
  3. Deeply anesthetize mouse using a small animal anesthesia machine using isoflurane (3% in oxygen). Check anesthesia depth using limb withdrawal reflex before continuing.
  4. Decapitate mouse using large scissors and immediately chill head in ice-cold cutting solution.
  5. Open skull by a single midline incision from caudal to rostral and gently push pieces of skull to the sides using forceps. Rapidly remove brain by gently lifting it out of the skull using a small, rounded spatula. Cut off cerebellum with scalpel. Place brain in ice-cold cutting solution.
  6. For medial prefrontal cortex or mPFC injection sites: cut off anterior part of the brain (containing mPFC) using a scalpel and put in ice-cold cutting solution until slicing.
  7. Remove excess cutting solution with filter paper and glue the posterior part of the brain onto the vibratome stage.
  8. For tilted amygdala slices, glue the brain on an agar block (4%) cut at a 35° angle (Figure 1D, middle). For coronal amygdala slices, medial geniculate nucleus/ posterior intralaminar thalamic nucleus (MGm/PIN) injection sites and mPFC injection sites, glue the brain directly on stage (Figure 1D, left and right). Place an additional agar block behind brain for stability while slicing.
  9. Place the stage in cutting chamber with ice-cold oxygenated cutting solution that is maintained at 4 °C using a cooling unit. Prepare acute slices of the amygdala (320 µm) using a sapphire blade. Place slices in an interface chamber supplied with oxygenated ACSF at room temperature (RT).
  10. After preparation of acute amygdala slices, place the interface chamber in a water bath at 36 °C to recover slices for 35 - 45 min. Subsequently, return the interface chamber to RT.
  11. During commencement of step 1.10, cut slices of the injection sites as described before for acute amygdala slices (steps 1.8 - 1.9). Recovery of slices in the water bath is not required here. Optional: To quickly estimate injection site location, observe slices on a stereoscope equipped with a fluorescent lamp and appropriate filter sets.

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Resultaten

Stereotactic virus injection diagram showing viral constructs in brain regions, fiber visualization.
Figure 1. Stereotactic Injections, Preparation of Acute Brain Slices, and Visualization of Presynaptic Fibers. (A, B) Stereotactic virus injection. A) Picture of anesthetized mouse placed in a stereotactic frame with skull exposed and t...

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Openbaarmakingen

No conflicts of interest declared.

Materialen

Lijst van materialen gebruikt in dit artikel
NaamBedrijfCatalogusnummerOpmerkingen
artificial cerebrospinal fluid (ACSF)
internal patch solutions
Magnesium Sulfate HeptahydrateRoth, GermanyP027.1prepare 2M stock solution in purified water
Slicer, Microm HM650VFisher Scientific, Germany920120
Cooling unit for tissue slicer, CU65Fisher Scientific, Germany770180
Sapphire bladeDelaware Diamond Knivescustom order, inquire with company
Stereoscope, SZX2-RFA16Olympus, Japan
Patch microscope, BX51WIOlympus, Japan
Bath temperature controler, TC05Luigs & Neumann, Germany200-100 500 0145
Cellulose nitrate filterpaper for interface chamberSatorius Stedim Biotech, Germany13006--50 ACN

Tags

Hersensnijden bij muizenvibratoomsnijdenmediale prefrontale cortexamygdala projectiespreparatie van hersenweefselgeoxygeneerde ACSFherstel bij fysiologische temperatuurhoekinstelling van agarblokstabilisatie van coupes