Method Article

Isolation of Multiple Cell Types from a Mouse Brain by Mechanical Homogenization

July 8th, 2025

In This Article

Abstract

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Source: Molina Estevez, F. J., et al. Simultaneous Flow Cytometric Characterization of Multiple Cell Types Retrieved from Mouse Brain/Spinal Cord Through Different Homogenization Methods. J. Vis. Exp. (2019).

This video demonstrates the isolation of multiple types of cells from mouse brain tissue. Tissue is first mechanically sheared using a tissue grinder in a salt solution to maintain an osmotic balance. The tissue homogenate is then subjected to density gradient centrifugation to remove cellular debris. Cells are then resuspended in a solution for further analysis.

Protocol

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Disclaimer:  All procedures involving sample collection have been performed in accordance with the institute's IRB guidelines.

1. Mechanical homogenization of the brain and spinal cord

NOTE: Volumes described in this section are enough for the homogenization of one-half brain or spinal cord.

  1. Pre-chill the glass mortar of the Dounce tissue grinder (Table of Materials) set on ice.
  2. Add 3 mL of pre-chilled 1x Hank's balanced salt solution (HBSS) to the mortar.
  3. Transfer the tissue (brain or spinal cord) from the we....

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Disclosures

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No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
10X HBSS (Calcium, Magnesium chloride, and Magnesium Sulfate-free)Gibco14185-052
70 mm Cell StrainerCorning431751
Conical Tubes (15 mL)CellTreat229411
Conical Tubes (50 mL)CellTreat229422
Dounce Tissue Grinder set (Includes Mortar as well as Pestles A and B)Sigma-AldrichD9063-1SET
PercollGE Healthcare10266569sold as not sterile reagent
PercollSigma65455529sterile reagent (to be used for applications requiring sterility)
Percoll PLUSSigmaGE17-5445-01reagent containing very low traces of endotoxin

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Tags

Mouse Brain TissueMechanical HomogenizationTissue GrinderDensity Gradient CentrifugationCell IsolationFlow CytometryHBSS BufferDebris RemovalCell SuspensionFACS BL Solution

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