All procedures involving sample collection have been performed in accordance with the institute's IRB guidelines.
1. Co-culture protocol
- Adjust the seeding day and concentration for UW479 and BT35 cell lines to reach 80% of confluent cells when co-culture should start, corresponding to 21 days of culture for glutamatergic neurons.
- Trypsinize UW479 and BT35 cells and seed them on the top of glutamatergic neurons in each dedicated microfluidic device (with a target density of 900 cell/mm2 for each cell type) before seeding the pediatric high-grade gliomas (pHGG) cells into the microfluidic device containing matured glutamatergic neurons.
- Maintain the co-cultures for 2 days under a controlled environment (37 °C, 5% CO2) with glutamatergic neuron Day11 and onward medium detailed in Table 1.
- Count pHGG cells using the microscopic pictures analyzed with image analysis software to assess their viability. Calculate the percentage of cells.
NOTE: Use the following formula: 100 - ((number of cells at D23 / number of cells at D21) x 100).
2. Electrophysiological recording
- Perform the electrophysiological recording with a commercial system and commercially available software.
NOTE: The experiments were carried out with a multielectrode array (MEA) that consisted of 30 µm diameter electrodes spaced by 100 µm.
- Perform a first electrophysiological recording on glutamatergic neurons at D21 before seeding of pHGG cells. Use the differentiated glutamatergic neurons as control and culture them alone in parallel to the co-culture. Do a second recording for both conditions as described in the next step numbered 3.
- Perform a second electrophysiological recording at D23 (after 2 days of co-culture).
Table 1: Culture media composition for hiPS-derived glutamatergic neurons.
| Components | Seeding medium | D4 medium | D7 medium | D11 and onward medium |
| DMEM/F-12 Medium | 0.5x | 0.25x | 0.125x | Ø |
| Neurobasal Medium | 0.5x | 0.25x | 0.125x | Ø |
| BrainPhys Medium | Ø | 0.5x | 0.75x | 1x |
| SM1 Supplement | 1x | 1x | 1x | 1x |
| N2 Supplement-A | 1x | 1x | 1x | 1x |
| Ala-Gln (GlutaMax) | 0.5 mM | 0.5 mM | 0.5 mM | 0.5 mM |
| BDNF | 10 ng/mL | 10 ng/mL | 10 ng/mL | 10 ng/mL |
| GDNF | 10 ng/mL | 10 ng/mL | 10 ng/mL | 10 ng/mL |
| TGF-β1 | 1 ng/mL | 1 ng/mL | 1 ng/mL | 1 ng/mL |
| Geltrex | 30 µg/mL | Ø | Ø | Ø |
| Seeding Supplement | 1x | Ø | Ø | Ø |
| Day 4 Supplement | Ø | 1x | Ø | Ø |