Method Article

Ultrastructural Analysis of a Mouse Brain Section Using Transmission Electron Microscopy

April 28th, 2025

In This Article

Abstract

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Source: Lutz, D., et.al. Assessment of Ultrastructural Neuroplasticity Parameters After In Utero Transduction of the Developing Mouse Brain and Spinal Cord. J. Vis. Exp. (2019).

This video demonstrates the preparation and transmission electron microscopy (TEM) analysis of a brain section from a mouse pup. The protocol starts with osmium tetroxide-fixed tissue embedded in resin, followed by precise trimming to isolate the region of interest and ultramicrotomy to produce semithin and ultrathin sections, which are visualized using light microscopy and TEM, respectively.

Protocol

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All procedures involving animal samples have been reviewed and approved by the appropriate animal ethical review committee.

1. Selection of Ultrastructural Neuroplasticity Parameters for Quantitative Analysis

  1. Mapping the area of interest
    1. Choose an area of interest (e.g., hippocampus or cerebellum) and localize the area in the section atlas by choosing....

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
Light microscope Basic DM ELeica-4x (N.A. 0.1 ∞/-), 10x (N.A. 0.22 ∞/0.17), 40x (N.A. 0.65 ∞/0.17), 100x (N.A. 1.25 ∞/0.17) objectives
Mosquito hemostatic forceps (12.5cm, curved)FST13010-12
Nickel grids, 200 meshTed Pella1GC200
Razor bladesSchick87-10489
Technovit 4004 two components glueKulzer
Thin vibrating razor blade deviceKrup-with Szabo thin blades
Toluidine blueSigma-Aldrich89640
Transmission electron microscope C20Phillips-up to 200 kV
Ultracut EReichert-Jung-ultramicrotome
AralditeCIBA-GEIGY23857.9resin for embedding of tissue
Osmium (VIII)-oxid Degussa 73219

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Tags

Transmission Electron MicroscopyUltrastructural AnalysisMouse Brain SectionOsmium Tetroxide FixationUltramicrotome SectioningSemithin SectionsUltrathin SectionsLight MicroscopyNickel GridsResin Embedding

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