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All procedures involving animal samples have been reviewed and approved by the appropriate animal ethical review committee.
1. Chamber preparation
NOTE: Each sample requires a slide with an imaging chamber in which the sample will be placed.
- Place the sample in the middle of the slide.
- Using a hot glue gun, create walls at the edges of the slide, almost as high as the tissue. Make sure to leave a small gap (approximately 5 mm) at one of the corners (Figure 1A, B).
- Apply 1-2 drops of the refractive index matching solution or RIMS on the sample to keep the upper surface moist and prevent bubbles from forming between the coverslip and the tissue.
- Immediately after applying the RIMS (Refractive index matching solution) drops, add the last layer of hot glue to the walls (so that they reach the height of the brain/slice) and progress immediately (while the hot glue is still liquid) to step 1.5.
- Seal the top with a coverslip, placing it as evenly as possible on the top of the still-warm hot glue layer (Figure 1C).
- Fill the chamber with the RIMS through the gap left in the hot glue walls (Figure 1D, E).
- Close the gap with hot glue. Leave no air inside (Figure 1F).
- If the hot glue walls extend beyond the slide's borders, cut the extending edges (Figure 1G).
- If the objective used for imaging is immersed, add another 2-3 mm of glue to the walls above the coverslip so that the immersion solution lasts longer (Figure 1H).