Waiting
Processando Login

Trial ends in Request Full Access Tell Your Colleague About Jove
Journal / Genetics / A Bioinformatics Pipeline to Accurately and…
JoVE Journal
Genetics

É necessário ter uma assinatura JoVE para assistir este

JoVE Journal Genetics
A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants
Systemic Delivery of MicroRNA Using Recombinant Adeno-associated Virus Serotype 9 to Treat Neuromuscular Diseases in Rodents
Journal (Genetics)
Systemic Delivery of MicroRNA Using Recombinant Adeno-associated Virus Serotype 9 to Treat Neuromuscular Diseases in Rodents
Ultralow Input Genome Sequencing Library Preparation from a Single Tardigrade Specimen
Journal (Genetics)
Ultralow Input Genome Sequencing Library Preparation from a Single Tardigrade Specimen
 

A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants

Article DOI: 10.3791/59864-v • 06:34 min • January 21st, 2020
January 21st, 2020 •
*1,2, *1,2, 2, 1
1Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture and Forestry Sciences, 2State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University
* These authors contributed equally

Capítulos

Resumo
Automatic Translation

A bioinformatics pipeline, namely miRDeep-P2 (miRDP2 for short), with updated plant miRNA criteria and an overhauled algorithm, could accurately and efficiently analyze microRNA transcriptomes in plants, especially for species with complex and large genomes.

Tags

Bioinformatics Pipeline MicroRNA Transcriptomes Plants MiRDeep2 Accurate Analysis Efficient Analysis Transcriptional Regulators Plant Development Environmental Challenges Running Time Sensitivity Accuracy False Positives Processing Time Fielding Strategy Scoring Algorithm Stringent Criteria MicroRNA Annotation Genome Function Step-by-step Guidance First-time Annotators Experienced Researchers Advantages Of MiRDeep2 Installation Instructions Test Data
Read Article

Get cutting-edge science videos from JoVE sent straight to your inbox every month.

Waiting X
Simple Hit Counter