This video demonstrates the use of scanning electron microscopy to visualize bacterial colonization and host–pathogen interactions in the bladder epithelium of a pre-infected mouse model.
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Method Article
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January 30th, 2026
This video demonstrates the use of scanning electron microscopy to visualize bacterial colonization and host–pathogen interactions in the bladder epithelium of a pre-infected mouse model.
All procedures involving animal models have been reviewed by the local institutional animal care committee and the JoVE veterinary review board.
Imaging bladders by scanning electron microscopy
NOTE: This procedure can be performed at any time point at which visualization of the urothelium is desired. As indicated in Figure 1 (purple boxes), uropathogenic E. coli (UPEC) -urothelial interactions are best visualized between 6 h and 24 h post-UPEC inoculation during the reservoir formation phase, and urothelial exfoliation triggered by Gardnerella vaginalis is best visualized between 3 h and 12 h after the second G. vaginalis exposure.
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Figure 1. Schematic of Mouse Model. The timeline is highlighted to reflect the phases or procedures of the model outlined in the protocol. Phase 1 (orange): Establishing intracellular uropathogenic E. coli (UPEC) reservoirs. Mice are ...
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| Name | Company | Catalog Number | Comments |
|---|---|---|---|
| 30G x 1/2 needles | BD | 305106 | For catheters |
| 5 1/2" straight forcep hemostat | McKesson | 487377 | In situ bladder fixation |
| ACE 600 Sputter coater | Leica | SEM sample processing | |
| Aluminum SEM stub | Ted Pella | 16111 | SEM sample processing |
| Calcium chloride | EMS | 12340 | In situ bladder fixation |
| Conductive carbon adhesive tab | Ted Pella | 16084-1 | SEM sample processing |
| Conductive silver paint | Ted Pella | 16034 | SEM sample processing |
| CPD 300 Critical Point Drier | Leica | SEM sample processing | |
| Cytofunnel metal clip | Simport | M964B | cytospun urinalysis |
| Ethanol | EMS | 15050 | SEM sample processing |
| Glucose | Sigma | G7528 | For NYCIII G. vaginalis growth media |
| Glutaraldehyde | EMS | 16320 | In situ bladder fixation |
| Hema 3 staining kit | Fisher | 23123869 | Cytospun urinalysis |
| HEPES | Cellgro | 25-060-Cl | For NYCIII G. vaginalis growth media |
| Iridium | Ted Pella | 91120 | SEM sample processing |
| Merlin FE-SEM | Zeiss | Scanning electron microscope | |
| Milli-Q Water Purifier | Millipore | IQ-7000 | SEM sample processing |
| Osmium tetroxide | EMS | 19170 | SEM sample processing |
| Paraformaldehyde | EMS | 15710 | In situ bladder fixation |
| Polyethylene tubing | Intramedic | 427401 | for catheters |
| Proteose Peptone #3 | Fisher | DF-122-17-4 | For NYCIII G. vaginalis growth media |
| PTFE coated double edge razor blade | EMS | 72000 | Cutting bladders for SEM |