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Method Article

Inoculating a Bacterial Pathogen into Arabidopsis Leaves via Vacuum Infiltration

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March 31st, 2026

In This Article

Abstract

Source: Rufián, J. S., et.al. Single-Cell Analysis of the Expression of Pseudomonas syringae Genes within the Plant Tissue. J. Vis. Exp. (2022)

This video demonstrates a vacuum infiltration method to introduce a bacterial pathogen into Arabidopsis plant leaves. The approach uses a prepared bacterial suspension and vacuum pulses to enable uniform entry through stomata, resulting in controlled leaf infection.

Protocol

1. Inoculation of Arabidopsis plants

NOTE: In this study, the strains Pseudomonas syringae pv. tomato DC3000 and P. syringae pv. phaseolicola 1448A were used.

  1. Prepare the P. syringae inoculum.
    1. Streak out the P. syringae strain of interest from a −80 °C glycerol stock onto an LB plate (10 g/L tryptone, 5 g/L NaCl, 5 g/L yeast extract, and 16 g/L bacteriological agar) supplemented with the appropriate antibiotics. Incubate at 28 °C for 40-48 h.
      NOTE: The use of antibiotics is recommende....

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Results

Plant growth experiment setup with mesh pot cover, seedling diagram, desiccator chamber, syringe extraction.

Figure 1: Bacterial inoculation and apoplast extraction using Arabidopsis plants.......

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
140 mm Petri dishes  No special requirements
Bacteriological agarRoko  
Gentamycin sulfateDuchefaG-0124 
Kanamycin monosulfatePhytotechnologyK378 
MgCl₂Merk  
NaClMerk  
Silwet L-77Cromton Europe Ltd  
TryptoneMerk  
Vacuum chamber 25 cm diameterKartell554 
Vacuum pumpGASTDOA-P504-BN 
Yeast ExtractMerk  
Ampicillin sodiumGoldBio  

Tags

Pseudomonas SyringaeSerial DilutionsOptical DensitySurfactant AdditionLeaf InfectionCFU ConcentrationGrowth Chamber