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Method Article

Harvesting Adeno-Associated Virus from Transfected Mammalian Cells

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August 31st, 2026

In This Article

Abstract

Source: Rghei, A. D., et al. Production of Adeno-Associated Virus Vectors in Cell Stacks for Preclinical Studies in Large Animal Models. J. Vis. Exp. (2021)

This video demonstrates the recovery of crude adeno-associated virus from transfected mammalian cells using chemical lysis and centrifugation, enabling high-yield AAV production for downstream purification and preclinical gene therapy applications.

Protocol

1. Harvesting AAV (adeno-associated virus) and chemical lysis of the transfected HEK293 (human embryonic kidney 293) cells

  1. Shake the cell culture chamber vigorously to dislodge the cells until the media appears cloudy from dislodged cells and pour into four 500 mL centrifuge tubes.
  2. Centrifuge the tubes at 18,000 x g for 30 min at 4 °C to pellet the cells. Pour the clarified supernatant into 1 L polyethylene terephthalate copolyester (PETG) bottle.NOTE: If one does not have access to a high-speed centrifuge, centrifuge at 12,000 x g for 40 min. The pelleted cells may not be solid at this speed and will slide as pouring out supernatant.
  3. Resus....

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
10 chamber cellstackCorning3271 
1L PETG bottleThermo Fisher Scientific2019-1000 
Dulbecco's Modified Eagle Medium (DMEM) with 1000 mg/L D-glucose, L-glutamineCytiva Life SciencesSH30022.01 
Fetal Bovine Serum (FBS)Thermo Fisher ScientificSH30396.03 
HEK293 cellsAmerican Tissue Culture CollectionCRL-1573Upon receipt, thaw the cells and culture as described in manufacturer’s protocol. Once cells have been minimally passaged and are growing well, freeze a subfraction for future in aliquots and store in liquid nitrogen. Always use cells below passage number 30. Once cultured cells have been passaged more than 30 times, it is recommended to restart a culture from the stored aliquots
Large Volume Centrifuge Tube Support CushionCorningCLS431124Support cushion must be used with large volume centrifuge tubes uless the centrifuge rotor has the approriate V-bottom cushions
Large Volume Centrifuge TubesCorningCLS431123-6EA500 mL centrifuge tubes

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