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Method Article

Expansion Pathology: A Method for High-resolution Optical Imaging of Clinical Tissue Samples

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April 30th, 2023

In This Article

Abstract

Source: Klimas, A. et al. Nanoscopic Imaging of Human Tissue Sections via Physical and Isotropic Expansion. J. Vis. Exp. (2019)

In this video, we describe a method called expansion pathology, a variant of expansion microscopy, wherein the clinical tissue specimens are chemically expanded using a polymer network for microscopic examination of nanoscale structures.

Protocol

1. In Situ Polymerization of Specimens

  1. Incubate the specimen in an anchoring solution.
    1. Prepare the anchoring solution (typically 250 µL is enough to cover the tissue section) by diluting the AcX stock solution in 1x PBS to a concentration of 0.03 mg/mL for samples fixed with non-aldehyde fixatives or 0.1 mg/mL for samples fixed with aldehyde fixatives, which have fewer free amines available to react with AcX.
    2. Place the slide in a 100 mm Petri dish and pipette the anchoring solution over the tissue. Incubate for at least 3 h at RT or overnight at 4 °C.
  2. Incubate the samples in gelling ....

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Results

Microscopy setup diagram with tissue in gelling solution on glass slide with coverslip spacers.
Figure 1: Gelation chamber for pathology samples. (A) Two spacers, such as two pieces of #1.5 cover glass cut with a diamond knife, are placed on either side of the tissue after incubating the sample in gelling solution at 4.......

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Disclosures

No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
6-well glass-bottom plate (#1.5 coverglass) Cellvis P06-1.5H-N
Acetone Fischer Scientifc A18-500
Acrylamide Sigma Aldrich A8887
Acryloyl-X SE, (AcX) Invitrogen A20770
Agarose Fischer Scientifc BP160-100
Ammonium persulfate (APS) Sigma Aldrich A3678 Initiatior
DAPI (1 mg/mL) Thermo Scientific 62248 Nuclear stain
Diamond knife No. 88 CM General Tools 31116
Ethanol Pharmco 111000200
Ethylenediaminetetraacetic acid (EDTA) 0.5 M VWR BDH7830-1
FFPE Kidney Sample USBiomax HuFPT072
Forceps
Micro cover Glass #1 (24 mm x 60 mm) VWR 48393 106
Micro cover Glass #1.5 (24 mm x 60 mm) VWR 48393 251
N,N,N′,N′-Tetramethylethylenediamine (TEMED) Sigma Aldrich T9281 Accelerator
N,N′-Methylenebisacrylamide Sigma Aldrich M7279
Nunclon 6-Well Cell Culture Dish Thermo Fisher 140675
Nunc 15 mL Conical Thermo Fisher 339651
Nunc 50 mL Conical Thermo Fisher 339653
Orbital Shaker
Paint brush
pH Meter
Phosphate Buffered Saline (PBS) 10x Solution Fischer Scientifc BP399-1
Plastic Petri Dish (100 mm) Fischer Scientifc FB0875713
Proteinase K (Molecular Biology Grade) Thermo Scientific EO0491
Razor blade Fischer Scientifc 12640
Safelock Microcentrifuge Tubes 1.5 mL Thermo Fisher 3457
Safelock Microcentrifuge Tubes 2.0 mL Thermo Fisher 3459
Sodium acrylate Sigma Aldrich 408220
Sodium chloride Sigma Aldrich S6191
Sodium citrate tribasic dihydrate Sigma Aldrich C8532-1KG
Tris Base Fischer Scientifc BP152-1
Triton X-100 Sigma Aldrich T8787
Xylene Sigma Aldrich 214736

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