| C57BL/6, male, 6-8 weeks old | Australian Bioresources Cenre, WA, Australia | | |
| Pertussis toxin | List Biological Laboratories, Inc., CA, USA | #181 | |
| 0.1M mouse-isotonic phosphated buffered salined (MT-PBS) | | | Laboratories will have their own protocol. |
| Isoflurane | Pharmachem, QLD, Australia | | Laboratories will have their own protocol for administration. |
| P0180–199 peptide | Wuxi Nordisk Biotech Co. Lt. SHG, CHN | | P0180–199, sequence S–S–K–R–G–R– Q–T–P–V–L–Y–A–M–L–D–H–S–R–S |
| Heat killed Mycobacterium tuberculosis (strain H37RA) | Difco, MI, USA | #231141 | |
| Freund's complete adjuvant (FCA) | Difco, MI, USA | #263910 | |
| 16% Paraformaldehyde (PFA) | Electron Microscopy Services | #15710 | Dilute to 4% PFA day of tissue collection. |
| 25% glutaraldheyde | ProSciTech Pty Ltd, QLD, Australia | #11-30-8 | Dilute to 2.5% glutaraldehyde day of fixation. |
| Sodium azide | Chem-Supply Pty Ltd, SA, Australia | SL189 | Create 10% (w/v) stock in 0.1M MT-PBS. Use at 0.03% (v/v). |
| Sucrose | Chem-Supply Pty Ltd, SA, Australia | SA030 | Use at 30% (w/v). |
| Optimum cutting temperature (OCT) medium | Sakura Finetek, CA, USA | #4583 | |
| Normal donkey serum | Merck Millipore, MA, USA | #S30-100 | Use as antibody diluent at 10% (v/v) or other concentration determined by own laboratory. |
| Triton-X 100 | Sigma Aldrich, MI, USA | #90o2-31-1 | Use in antibody diluent at 0.3% (v/v) or other concentration determined by own laboratory. |
| Rabbit anti-amyloid precursor protein (APP) | Invitrogen (Life Technologies), CA, USA | S12700 | Used at 1:400 or titrate in own lab. |
| Rabbit anti-contactin-associated protein-1 (Caspr) | Gift from Prof Elior Peles, Wiezmann Institute of Science, Israel | | Used at 1:500 or titrate in own lab. |
| Appropriate Alexa Fluor conjugated secondary antibodies | Molecular Probes (Life Technologies), OR, USA | Various | Use at 1:200 or titrate in own lab. Choice of species the antibody was raised in and Alexa Fluor chosen is at the discretion of each laboratory. |
| Aqueous mounting solution | Dako (Agilent), CA, USA | #S3023 | Each laboratory will have their own preference. |
| Equipment | | | |
| 0.5 mL syringe with 301/2 g needles | BD | #326105 | |
| 23 g needles | BD | #305143 | |
| Red ink pad | | | Any red ink pad or red food dye could be used to mark the animals' feet. |
| DigiGate apparatus (includes treadmill) | eMouse Specifics Inc. Framingham, MA | | |
| DigiGate Imaging System | eMouse Specifics Inc. Framingham, MA | | |
| Stopwatch | | | Any timer may be used. |
| DigiGait 8 Software | eMouse Specifics Inc. Framingham, MA | | |
| Dissecting microscope | Zeiss | | Any appropriate dissecting microscope may be used. |
| Charged slides | Superfrost Plus, Lomb Scientific Pty Ltd | SF41296SP | |
| Cyrostat | Leica | | Any suitable cyrostat may be used. |
| Perfusion equipment and dissecting instruments | | | Labs will have their own perfusion protoctols. |
| Opaque humified chamber | | | Labs may produce their own using an opaque plastic container. |
| PAP pene | GeneTex (USA) | | Wax pencil, or surface tension may also be used to create a well around the tissue section. |
| Confocal microscope | Zeis LSM780 | | Any confocal microscope with appropriate laser lines may be used. |
| FIJI/Image J | National Institues of Health | | Available from www.fiji.sc |