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Method Article

Crosslinking Neuronal Surface Proteins in the Mouse Brain using a Chemical Crosslinking Assay

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July 8th, 2025

In This Article

Abstract

Source: Sumitomo, A., et al. BS3 Chemical Crosslinking Assay: Evaluating the Effect of Chronic Stress on Cell Surface GABAA Receptor Presentation in the Rodent Brain. J. Vis. Exp. (2023)

This video demonstrates the crosslinking of neuronal surface proteins using Bis-sulfosuccinimidyl suberate or BS3. Isolated and chilled mouse brain is sectioned coronally. The desired region is extracted from the sections, minced, and treated with BS3. BS3 crosslinks surface proteins like GABA receptors, leaving internal proteins unaltered. The reaction is quenched with glycine before processing the samples for further analysis.

Protocol

All procedures involving animal samples have been reviewed and approved by the appropriate animal ethical review committee.

1. Preparation of the working solutions and buffers

NOTE: On the morning of the assay, prepare the following solutions. This calculation is based on the necessary solutions to process two brain regions (i.e., the prefrontal cortex [PFC] and hippocampus [HPC]) from 12 mice.

  1. Prepare artificial cerebrospinal fluid (aCSF, pH = 7.4) as mentioned in Table 1. Dispense 750 µL of aCSF into each sampling tube, and place them in the m....

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Results

Dissection setup with mouse brain in petri dish on ice for anatomical study and preservation.
Figure 1: Whole mouse brain dissected out of the skull and placed in ice-cold PBS. Immediately after the whole brain was removed from the skull, it was submerged in ice-cold PBS for 10-15 s in a Petri dish on ice. This slows down brain metabolism and minimizes.......

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Disclosures

No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
0.5 M EDTA, pH 8.0Invitrogen15575020
1 M HEPESGibco15630080
10x TBSBio-Rad1706435
2.5 M (45%, w/v) GlucoseSigmaG8769
2-mercaptoethanolSigmaM3148
4x SDS sample buffer (Laemmli)Bio-Rad1610747
Bis(sulfosuccinimidyl)suberate (BS3)PierceA39266No-Weigh Format; 10 x 2 mg
Brain matrixTed Pella15003For mouse, 30 g adult, coronal, 1 mm
Calcium chloride (CaCl2)SigmaC4901
Curved probeFine Science Tools10088-15Gross Anatomy Probe; angled 45
Deionized watermilli-QEQ 7000Ultrapure water [resistivity 18.2 MΩ·cm @ 25 °C; total organic carbon (TOC) ≤ 5 ppb]
Dithiothreitol (DTT)Sigma10197777001
Filter paper (3MM)Whatman3030-917
Forceps (large)Fine Science Tools11152-10Extra Fine Graefe Forceps
Forceps (small)Fine Science Tools11251-10Dumont #5 Forceps
GlycineSigmaW328707
Magnesium chloride SigmaM2670
Nonidet-P40, substitute (NP-40)SantaCruz68412-54-4
Potassium chloride (KCl)SigmaP9541
Scissors (large)Fine Science Tools14007-14Surgical Scissors - Serrated
Scissors (small)Fine Science Tools14060-09Fine Scissors - Sharp
Sodium chloride (NaCl)SigmaS9888
Tissue punch (ID 1 mm)Ted Pella15110-10Miltex Biopsy Punch with Plunger, ID 1.0 mm, OD 1.27 mm
Tube rotator (LabRoller)LabnetH5000

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