Method Article

Two-Photon Microscopy of Astrocytes and Excitatory Neurons in a Cleared Mouse Hippocampal Tissue

May 29th, 2025

In This Article

Abstract

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Source: Refaeli, R., et al., Investigation of Spatial Interaction Between Astrocytes and Neurons in Cleared Brains. J. Vis. Exp. (2022)

The video demonstrates the preparation of a chamber and the neuroimaging of cleared mouse hippocampal tissue using two-photon microscopy to visualize the spatial interactions between fluorescently labeled astrocytes and excitatory neurons.

Protocol

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All procedures involving animal samples have been reviewed and approved by the appropriate animal ethical review committee.

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Results

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Hydrogel sealing process; sequence of steps in lab setup for cell culture experiment.

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
AAV1-GFAP::TdTomatoELSC Vector Core Facility (EVCF) Viral vector used to detect astrocytes
AAV5-CaMKII::eGFPELSC Vector Core Facility (EVCF) Viral vector used to detect neurons
AAV5-CaMKII::H2B-eGFPELSC Vector Core Facility (EVCF) Viral vector used to detect neuronal nuclei
AAV5-CaMKII::TdTomatoELSC Vector Core Facility (EVCF) Viral vector used to detect neurons
Imaris softwareBitplane, UK A software that allows 3D analysis of images
RapiClearSunJin lab#RC147002
RapiClear CSSunJin lab#RCCS002
SyGlass software A software that allows 3D analysis of images using virtual reality
Two photon microscopeNeurolabware Ti:sapphire laser (Chameleon Discovery TPC, Coherent), GaAsP photo-multiplier tubes (Hamamatsu, H10770-40) , bandpass filter (Semrock), water immersion 16x objective (Nikon, 0.8 NA)
VA-044 InitiatorWako#011-19365

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Tags

Astrocyte Neuron InteractionRefractive Index MatchingFluorescent Protein LabelingHydrogel EmbeddingHot Glue ChamberNear Infrared ExcitationSpatial Proximity ImagingCleared Brain Tissue

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