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Research Article
Erratum Notice
Important: There has been an erratum issued for this article. View Erratum Notice
Retraction Notice
The article Assisted Selection of Biomarkers by Linear Discriminant Analysis Effect Size (LEfSe) in Microbiome Data (10.3791/61715) has been retracted by the journal upon the authors' request due to a conflict regarding the data and methodology. View Retraction Notice
This video demonstrates calcium imaging to visualize and analyze the activity of enteric neurons and glia in mouse Colonic Myenteric plexus preparations.
All procedures involving animal samples have been reviewed and approved by the appropriate animal ethical review committee.
1.Prepare Modified Krebs buffer.
Make a modified Krebs buffer such that the final concentrations (in mM) of the components are as follows: 121 NaCl, 5.9 KCl, 2.5 CaCl2, 1.2 MgCl2, 1.2 NaH2PO4, 10 HEPES, 21.2 NaHCO3, 1 pyruvic acid and 8 glucose (pH adjusted to 7.4 with NaOH). Add 3 μM nicardipine and 1 μM scopolamine to inhibit muscle contractions during Ca2+ imaging and whole-mount dissections.
2. Imaging and Analysis
NOTE: Use at least a basic imaging rig with a fluorescent light source, microscope, a quality CCD camera and appropriate acquisition software. Vary the addition of other components depending on the light source and specific application. A filter wheel and shutter must be used with a traditional xenon arc light source. However, LED light sources and illumination systems do not require those components.
| Fluo-4 AM dye | Invitrogen | F-14201 |
| Glucose | Sigma | G8270 |
| Insect pins | Fine Science Tools | Minutien Pins |
| iQ Live Cell Imaging Software | Andor | Andor iQ3 |
| Potassium chloride | Sigma | P3911 |
| Magnesium chloride | Sigma | M9272 |
| Sodium chloride | Sigma | S9888 |
| Sodium dihydrogen phosphate | Sigma | S8282 |
| Sodium bicarbonate | Sigma | S6014 |
| Neo sCMOS camera | Andor | Neo 5.5 sCMOS |
| Nicardipine | Sigma | N7510 |
| Peristaltic pump | Harvard Apparatus | Model 720 |
| Pluronic F-127 | Invitrogen | P3000MP |
| Probenecid | Molecular Probes | P36400 |
| Scopolamine | Sigma | S1013 |
| Sutter Lambda DG-4 | Sutter | DG-4 |
| Sylgard | Dow Corning | 184 |
| Temperature Controller | Warner Instruments | TC-344C |