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$$\longleftharp{xx}$$,
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Importance of pre-dawn treatment
To obtain a high frequency of outcross progeny it is essential to have highly synchronous anthesis of male and female parents. Initially, we cycled temperature and light regimes (31 °C/22 °C, day/night) and used the S. viridis accession A10.1 for all pollinations. Under these conditions, most flowers open early in the morning before the temperature rises to 31 °C, though a few flowers open randomly between 8:00 AM-8:00 PM. Previous studies in S. italica indicate that time of day, location and season contribute to variation in anthesis 7,15,16. Siles et al.6 noted that anthesis was associated with rapid changes in temperature and humidity, but not with low temperature and high humidity, per se, as concluded in previous studies 7,15. Therefore, we employed a pre-dawn cold treatment of 15 °C for 30 min (from 8:30 AM-9:00 AM) to mimic the natural pre-dawn condition. This pre-dawn cold treatment aided in synchronizing anthesis in the parents. We observed that despite setting the chamber for relative humidity levels of 50%, the relative humidity inside the chamber increased to a level above 70% as the temperature dropped from 22 °C to 15 °C and continued to stay above 70% until the temperature gradually rose to 31 °C after 9:30 AM. At 9:00 AM, emasculated female parents and plants of male parent are brought to the lab (T: 24.06 °C ± 0.13 °C, RH: 21.79% ± 1.15%). Flowers of the male parents start opening around 10:10 AM, and pollination can be performed at 10:30 AM-11:00 AM. A detailed list of all reagents and equipment is provided in Table 2.
Importance of panicle preparation for emasculation
Under the chamber conditions in this study (Figure 1), the duration of primary panicle blooming ranged from 2-3 days. Typically, flowers located on the distal middle of the inflorescence (Figure 2A) open first and opening precedes proximally and distally. The ideal number of flowers to be retained on the panicle is 20-30. Caution should be taken during the removal of immature flowers so that only well-developed flowers (the topmost flower or biggest on the spikelet 17) are retained. Labeling with red marker on both sides of the flowers helps to efficiently distinguish putative outcross progeny from seeds from newly developed flowers after emasculation. In addition, it is important to leave the bristles on the panicles before emasculation to protect the florets from extensive heat damage; however, as an option, they can be removed after emasculation using spring scissors in order to facilitate pollination, especially when a panicle binding technique is employed (Figures 2C and 2D).
Optimized temperature and treatment duration for warm water treatment
The basis for emasculation through warm water dipping is that pollen is more sensitive to heat than the stigmatic surface. However, the duration and temperature of heat treatments may vary among Setaria species and accessions. In general, a higher temperature with a shorter treatment time or a lower temperature with a longer treatment time will have the same effect on emasculation. It has been reported that a heat treatment of 42 °C for 20 min 10 or 47 °C for 10 min 14 rendered S. italica pollen non-viable, but the efficiency of these treatments was not determined. We have developed our protocol following the hypothesis that under an optimized temperature and duration of treatment, pollen of all flowers retained on the female parent will be non-viable while stigmas will remain receptive. However, after comparing and analyzing the effects of several temperatures and treatment periods (Table 1), we found that the sensitivity to the heat treatment varies among the flowers retained on each panicle, thus it is hard to completely eliminate seeds resulting from self-pollination. We conclude that the efficiency of producing outcross progeny is the greatest when treatments are performed at 48 °C for 3-6 min in S. viridis accession A10.1.
Peak time of anthesis and cross-pollination
When the flowers reach maturity and are about to open, anthers are yellowish white in color and pollen is shed as soon as anthers exsert from the flowers 8. Anthers gradually turn brown after pollen is shed as the flowers begin to close. Once released, the viability of pollen is unknown. Therefore, it is critical to use the pollen from opening or freshly opened flowers on the male parent as soon as possible. Under our chamber conditions (Figure 1), the majority of flowers of the male parents start to open at 10:10 AM and the opened flowers shed pollen at 10:30 AM. Thus, the desirable window for performing pollination is between 10:30 AM and 11:00 AM. The stigmas remain outside the glumes after flowers close and may be receptive to pollen. This has been previously observed and confirmed in S. italica that the stigmas are receptive for about 48 hr post-flower opening by Siles et al.6, so it is important to bag panicles following heat treatment and after performing controlled crosses. As discussed above, we recommend performing pollinations on both Day 2 and Day 3 post-emasculation.
Methods for pollination
We compared the efficiency of three pollination techniques. If blooming flowers are not limiting, panicle-to-panicle pollination is the most efficient technique and will yield a higher number of outcross progeny. If blooming panicles are limiting, a higher frequency of outcross progeny will be produced when the anther-to-stigma method is used. We have obtained outcross progeny from both methods successfully. The "binding panicles" method has been used in crossing S. italica 6 but we found this method to be the least efficient method as the time window for pollen shedding of the male parent is short. Moreover, there is less control over pollination and the bristles on S. viridis panicles may also hinder the movement of pollen onto the stigmatic surface.
Seed harvesting, drying and storage
After harvesting, seeds should be dried at 30-33 °C for 2 days. Anthecium should be removed for GUS staining, if necessary. Seeds should be stored in a dry, cool location (T: 24.06 °C ± 0.13 °C, RH: 21.79% ± 1.15%) for short-term storage (less than two years) or in a seed chamber (T: 4.0-10 °C ± 1.0 °C, RH: 20% ± 1%) for long-term storage. Poor storage conditions may result in low viability rates 8. We have observed that the germination rate of S. viridis A10.1 is approximately 5% when sown 4 days after harvesting, but can be increased to 90-96% after storage in the laboratory (T: 24.06 °C ± 0.13 °C, RH: 21.79% ± 1.15%) for 110 days post-harvesting followed by a three-day stratification at -80 °C to break seed dormancy. For the stratification at -80 °C, dry seeds can be placed in an airtight container (e.g. micro-centrifuge tube or coin envelope in a sealed plastic bag) and kept at -80 °C for 3 days before planting. After 16 months of storage in the laboratory (T: 24.06 °C ± 0.13 °C, RH: 21.79% ± 1.15%), germination percentages of 90-95% can still be obtained. In addition, to break the dormancy, seeds can be dried at 30-33 °C for 2 days after harvesting, and then given three-day stratification at -80 °C followed by the removal of anthecium before planting. After these treatments, seed germination rates of up to 33% can be achieved.
Advantages, limitations and possible modifications
Here we provide the first standard protocol for performing crosses in S. viridis A10.1 by using a heat treatment for emasculation. In contrast to physical emasculation, this protocol is less invasive and relatively easy to establish in a lab. It usually takes about 15 min to trim one panicle and about 15 panicles can be trimmed and crossed/person/day. Assuming an average of 3-5 outcross progeny/panicle can be recovered under optimized conditions, a total of 45-75 outcross progeny can be produced by one person in a single day. Furthermore, this technique can be applied to crosses in other Setaria species, though additional optimizations will be likely. If growth chamber space is limited, plants can be grown in green house or growth chambers without a pre-dawn treatment until the panicle emerges before they are moved to the optimized chamber conditions.