Experimental procedures were approved by the Fundación Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC) and the Comunidad Autónoma de Madrid in accordance with Spanish and European guidelines. Mice were bred in specific pathogen free (SPF) conditions and were euthanized by carbon dioxide (CO2) inhalation.
1. Isolation of Mouse Bone Marrow Cells from Tibias and Femurs
NOTE: The C57BL/6 congenic mouse strain carries the differential leukocyte marker Ptprca, generally recognized as CD45.1 or Ly5.1, whereas wild-type C57BL strains carry the Ptprcb allele, known as CD45.2 or Ly5.2. CD45.1 and CD45.2 variants can be distinguished by flow cytometry using antibodies. CD45.1, CD45.2, and CD45.1/CD45.2 mice can be used as cell sources or as recipients for adoptive transfer, permitting tracing of the distinct cell populations by flow cytometry. Preferentially use age-and sex-matched male or female mice below 12 weeks of age.
- Preparation of Femurs and Tibias
- Euthanize mice using the protocol approved by the institutional animal care committee.
- Disinfect the hind limbs by spraying the animal surface with 70% ethanol.
- Use sterile scissors, forceps and scalpels. With a scalpel, make a cut in the skin and remove the skin from the distal part of the mouse including the skin covering the posterior extremities. Peel the skin around the lower calf muscle and remove the skin from the legs entirely (Figure 2A, 2B).
- Separate the quadriceps muscle from the femur using a scalpel. Disarticulate the hip joint without breaking the femur head. Remove the muscles from the tibia using a scalpel (Figure 2C, 2D). Separate the femur from the tibia without breaking the bone ends.
- Keep the bones in a Petri dish containing 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin in ice-cold 1x Roswell Park Memorial Institute (RPMI) 1640 medium.
- Cell Isolation
NOTE: All subsequent steps must be performed under a culture hood and with sterile material to avoid contamination.
- In a sterile Petri dish, carefully cut off the proximal and distal ends of each bone with a scalpel.
- Flush the bones repeatedly with a total volume of 10 mL of warm complete RPMI medium (RPMI + 10% FBS, 2 mM EDTA, 1% penicillin/streptomycin, 20 mM HEPES, 55 µM 2-mercaptoethanol, 1 mM sodium pyruvate, and 2 mM L-glutamine). Flush the bones from both ends using a 25 G needle attached to a 1 mL syringe.
- Transfer the effluate to a 50 mL conical tube fitted with a 70 µm nylon web filter. Carefully dislodge debris and cell conglomerates by gentle stirring and pipetting.
- Centrifuge the cell suspension at 250 x g for 10 min at room temperature (RT).
- Resuspend the cell pellet in 1 mL of cold red-blood-cell lysis buffer (0.15 M NH4Cl + 1 mM KHCO3 + 0.1 mM EDTA, adjusted pH to 7.2 with 1 N HCl, 0.4 µm sterile filtered, and stored at 4 °C). Maintain on ice for 5 min with the manual shaking.
- Add 10 mL of cold buffer (1x phosphate buffered saline (PBS) + 2 mM EDTA + 2% bovine serum albumin (BSA)) to inactivate and wash out the red-blood-cell lysis buffer.
- Centrifuge the cell suspension at 250 x g for 5 min at 4 °C.
- Wash cells with 25 mL of complete RPMI medium and centrifuge at 250 x g for 5 min at 4 °C.
- Resuspend the cells in 5 mL of complete RPMI medium. Mix 50 µL of the cell suspension 1:1 with trypan blue. Determine the cell number in a counting chamber under a microscope. Calculate the cell number using the formula: Cells/mL = [(non-stained cell count/4) x 2 x 10,000]12.
NOTE: This method yields 40 x 106 to 60 x 106 bone marrow cells per uninfected 8 to 12 week-old C57BL/6 mouse.
- Centrifuge the cell suspension at 250 x g for 5 min at 4 °C.
2. DC Differentiation, Maturation and Antigen Loading
- BM Cell Harvesting
- Seed the complete culture on 6-well ultra-low-attachment surface plates at 106 cells per mL of medium, typically in 5 mL per well. Differentiated macrophages will attach to the culture-plates. After 12 h, transfer the supernatant, which mainly contains monocytes, to clean 6-well plates, discarding the old 6-well plates with the adhered macrophages.
- To promote cell differentiation, culture the non-adherent cells at 5 x 105 cells per mL in typically 5 mL per well of complete RPMI medium containing 20 ng/mL commercially obtained recombinant murine GM-CSF at 37 °C and 5% carbon dioxide (CO2) and observe daily.
- Every 3 days, spin down suspended cells and collect the adherent cells with 5 mM EDTA in PBS and spin down. Combine and resuspend at 5 x 105 cells/mL in fresh medium containing 20 ng/mL rm-GM-CSF.
- On the day 8, collect adherent and detached cells as above and resuspend at 5 x 105 cells/mL in medium containing 20 ng/mL GM-CSF and 20 ng/mL lipopolysaccharide (LPS) for 24 h in a non-tissue culture-treated sterile Petri dish, to induce high MHC-II, CD80 and CD86 expression.
- Check DC differentiation by flow cytometry as indicated in step 2.2.
- Flow Cytometry Differentiation and Maturation Analysis.
- Centrifuge the cell suspension at 250 x g for 5 min at 4 °C. Repeat this step twice.
- Block Fc receptors by incubating the resuspended cell pellet in mouse Fc receptor blocker (purified anti mouse CD16/CD32 IgG2b antibody) for 15 min at 4 °C according to the manufacturer's instructions.
- Centrifuge the cell suspension at 250 x g for 5 min at 4 °C.
- For each probe, resuspend 250,000 cells in 300 µL of flow cytometry buffer (1x PBS + 2 mM EDTA + 2% BSA) at 4 °C.
- Transfer 30 µL of cell solution per well to a 96-well-plate.
- Centrifuge the cell suspension at 250 x g for 5 min at 4 °C.
- Discard the supernatant and add 30 µL of antibody-containing buffer to each well following the manufacturer's indications. Incubate the cells with antibodies for 20 min at 4 °C.
NOTE: Usually employed markers for DCs, monocytes, and macrophages are CD11b, CD64, CD115, CD11c, MHCII, CD80, and CD86 (Figure 3).
- Centrifuge the samples at 250 x g for 5 min at 4 °C and resuspend in 200 µL per well of cold flow cytometry buffer containing a marker to exclude dead cells (e.g., propidium iodide, 4′,6-diamidino-2-phenylindole (DAPI) or an amine-reactive dye) at the manufacturer's recommended concentration13.
- Monitor cell differentiation by transferring the samples to flow cytometry tubes and performing the flow cytometry analysis excluding dead cells on days 0, 3, 6, and 9.
- DC Antigen loading.
- On day 8, centrifuge the samples at 250 x g for 5 min at 4 °C and resuspend the pellets in 200 µL medium (RPMI + 10% FBS without antibiotics). Repeat this step twice.
- Incubate the DCs with 10 µg/mL OVAp (323-339; ISQAVHAAHAEINEAGR) per 1 x 107 DCs in 1 mL of medium (RMPI + 1% FBS) in a plastic tube for at least 30 min at 37 °C. Use non OVAp-loaded DCs as a negative control condition.
- Centrifuge the samples at 250 x g for 5 min at 4 °C and resuspend the pellets in 200 µL complete RPMI medium. Repeat this step twice.
- Centrifuge the samples at 250 x g for 5 min at 4 °C and resuspend the pellets in 200 µL medium (RPMI + 10% FBS) at 2 x 106 cells/mL.
3. Isolation of Naïve CD4 T Cells from OTII Mice
NOTE: This method yields approximately 100 x 106 spleenocytes per uninfected 8 to 12 week-old C57BL/6 mouse. Both males and females can be used. CD4 T cells can be isolated from spleen or lymph nodes; CD4 T cells account for approximately 25% and 50% of cells in these organs, respectively. Perform the following steps in sterile conditions.
- Isolate inguinal, axillary, brachial, cervical, and mesenteric lymph nodes and the spleen from OTII transgenic mice (Figure 4) and transfer them to a plastic Petri dish containing 10 mL of complete RPMI medium.
- Rinse the cell strainer with 2 mL of complete RPMI medium and remove it from the 50 mL tube. Transfer lymph nodes and spleen to a 70 µm cell strainer placed in a 50 mL tube. Homogenize using a syringe plunger (Figure 5) and add medium up to 15 mL.
- Centrifuge the samples at 250 x g for 5 min at 4 °C and resuspend the pellet in 15 mL of complete RPMI medium. Repeat this step twice.
- For spleen cell suspension, resuspend the cell pellet and lyse the red blood cells as indicated in step 1.2.5.
- Centrifuge the cell suspension at 250 x g for 5 min at 4 °C.
- Wash cells with 25 mL of complete RPMI medium and centrifuge at 250 x g for 5 min at RT.
- Resuspend the cells in 5 mL of medium. Mix 50 µL of the cell suspension 1:1 with Trypan blue. Determine the cell number using a counting chamber under a microscope. Calculate the cell number using the formula: cells/mL = [(non-stained cell count/4) x 2 x 10,000]12.
- Repeat step 2.2.2.
- Following the manufacturer's instructions, incubate the cells with 1:800 dilutions of biotinylated antibodies to CD8α, IgM, B220, CD19, MHCII (I-Ab), CD11b, CD11c, CD44, CD25, and DX5 for 30 min on ice for later negative selection of CD4 T cells.
- Following the manufacturer's instructions and based on the number of cells and the capacity of the beads, calculate the required amount of streptavidin-coated magnetic microbeads and isolate CD4 T cells using a magnetic cell separator and the appropriate separation columns.
- Resuspend the cells in 5 mL of complete RPMI medium and keep them on ice while counting live cells as described in step 3.7.
- Extract 2 x 105 cells and check the purity of the collected cells using anti CD4, CD3, B220 and CD8 fluorescent antibodies in a flow cytometer using manufacturer-recommending antibody dilutions.
- To stain isolated naïve CD4/OTII T cells, resuspend 106 cells in 500 µL buffer (1x PBS + 2 mM EDTA + 2% BSA). Prepare 500 µL buffer (1x PBS + 2 mM EDTA + 2% BSA) containing double the final manufacturer-recommended concentration of vital cell tracer dye. Mix both solutions by slowly adding the cell tracer solution to the cell suspension. Incubate the cells for 5 min at 37 °C.
- Wash the cells with 5 mL of complete RPMI medium and centrifuge at 250 x g for 5 min at 4 °C. Repeat this step twice. Resuspend the cells in 1 mL of complete RPMI medium at 1 x 107cells/mL.
4. In Vivo Activation, Proliferation and Th1 Differentiation Assay
NOTE: The vital cell tracer dye carboxyfluorescein diacetate succinimidyl ester (CFSE) and other succinimidyl ester-based dyes, which are excited and emit fluorescence at different wavelengths, are widely used to assess lymphocyte proliferation by flow cytometry due to their high fluorescence intensity, long-life, low variability, and low toxicity14.
- Adoptively transfer intravenously (i.v.) 1 x 106 live vital cell tracer dye-stained naïve CD4/OTII T cells in 100 µL of PBS per mouse. Labeled T cells can be adoptively transferred by tail vein or retro-orbital injection15; in both cases, the cells will home to lymphoid organs (Figure 6A).
- Challenge the recipient mice one day later by adoptively transferring 100,000 LPS-matured OVAp-loaded DCs by subcutaneous injection (s.i.) in the footpads (Figure 6B).
- Harvest popliteal lymph nodes from recipient mice and process them until the obtainment of single cell suspensions following the same steps as previously described in 3.1 and 3.2. Do this on day 2 post-immunization to measure CD4/OTII T cell activation, and on day 5 to measure proliferation plus Th1 differentiation.
- To analyze T cell activation on day 2, stain cells with fluorescent antibodies against CD4, CD69, and CD25 (optionally CD45.1 and CD45.2) and determine the percentage of C69+CD25+ T cells in the CD4 population. Analyze by flow cytometry (Figure 7).
- To check T cell proliferation on day 5, stain cells using appropriate fluorescent antibodies against CD4 and optionally CD45.1 and CD45.2. Analyze the decay of the vital cell tracer dye signal in the CD4 population by flow cytometry (Figure 8). Several parameters can be determined in these studies, such as the number of cell divisions undergone by cells labelled with the vital cell tracer dye, the percentage of dividing cells in each fluorescence peak, and the percentage of dividing cells in the total cell population.
- To determine Th1 differentiation at day 5, plate 400,000 cells per well of a 96-well plate in 200 µL of complete RPMI medium containing 1 µM ionomycin and 10 ng/mL phorbol 12 myristate 13 acetate (PMA) for 6 h at 37 °C in the incubator. For the last 4 h, add 3–10 µg/mL brefeldin A to block cytokine secretion to the medium.
- Centrifuge the plates for 5 min at 250 x g at 4 °C. Discard the supernatant by rapid inversion of the 96-well plate.
- Repeat step 2.2.2.
- Stain cell membranes by incubating for 15 min at 4 °C in 30 µL of buffer (1x PBS + 2 mM EDTA + 2% BSA) containing antibodies to CD4 and optionally to CD45.1 and CD45.2 at manufacturer-recommended dilutions. Wash the cells by adding 150 µL of buffer (1x PBS + 2 mM EDTA + 2% BSA) and centrifuge the plates for 5 min at 250 x g at 4 °C and discard supernatant.
- Fix the cells by adding 100 µL of 2% paraformaldehyde/1% sucrose for 20 min at RT. Centrifuge the plates for 5 min at 1,000 x g and 4 °C. Discard the supernatant.
- Permeabilize the cells by adding 50 µL of intracellular permeabilization buffer (1x PBS + 0.1% BSA, 0.01 M HEPES, 0.3% saponin) and incubate for 30 min at 4 °C.
- Add 150 µL of PBS and centrifuge for 5 min at 1,000 x g at RT. Discard the supernatant.
- Stain intracellular cytokines by adding 30 µL of fluorophore-conjugated anti IFNγ antibody in buffer (PBS + 0.1% saponin) and incubate for 30 min at RT.
- Wash the cells by adding 150 µL of buffer (PBS + 0.1% saponin). Centrifuge the plates for 5 min at 1,000 x g at RT and discard the supernatant. Repeat this step twice.
- Analyze cell populations by flow cytometry (Figure 8).