| advanced Dulbecco’s modified EagleMedium (aDMEM) | Gibco | 12491-015 | cell culture medium for fibroblasts |
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| Aqua Stabil | Julabo | 8940012 | prevent microorganism growth in bioreactor-hydraulic reservoir |
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| Bovine fibrinogen | Sigma | F8630 | to prepare fibrinogen gel to seed the cells on the electrospun scaffold |
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| Bovine thrombin | Sigma | T4648 | to prepare fibrinogen gel to seed the cells on the electrospun scaffold |
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| Centrifuge | Eppendorf | 5804 | to spin down cells and conditioned medium |
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| Clamp scissor - "kelly forceps" | Almedic | P-422 | clamp the silicone tubing and apply pre-stretch to the scaffold so the scaffold can be sutured into the engraved groove (autoclave at step 1, step 7) |
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| CO2 cell culture incubators | Sanyo | MCO-170AIC-PE | for cell culturing |
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| Compressed air reservoir | Festo | CRVZS-5 | smoothing air pressure fluctuations and create time delays for pressure build-up |
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| Custom Matlab script to calculate the maximum stretches | Matlab | R2017. The Mathworks, Natick, MA | calculate the minimum and maximum outer diameter of the electrospun scaffold |
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| Data acquisition board | National Instruments | BNC-2090 | data processing in between amplifier system and computer |
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| Ethanol | VWR | VWRK4096-9005 | to keep sterile working conditions |
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| Fetal bovine calf serum (FBS) | Greiner | 758087 | cell culture medium supplement; serum-supplement |
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| Flow culture chamber compartments, consisting of a pressure conduit with engraved grooves and small holes to apply pressure on silicone tubing, a screw thread, nose cone, top compartment with flow inlet and bottom compartment flow outlet, adapter bushing | Custom made, Department of Biomedical Engineering, Eindhoven University of Technology | n.a. | flow culture chamber compartments (autoclave at step 1, step 7) |
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| Glass Pasteur pipet | Assistant | HE40567002 | apply vacuum on electrospun scaffold (autoclave at step 1) |
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| Glass tubes of the flow culture chamber | Custon made, Equipment & Prototype Center, Eindhoven University of Technology | n.a. | part of the flow culture chamber (clean and store in 70% ethanol, at step 1 and 7) |
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| GlutaMax | Gibco | 35050061 | cell culture medium amino acid supplement, minimizes ammonia build-up |
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| High speed camera | MotionScope | M-5 | to monitor the stretch during culture; time-lapse photographs of the scaffolds are captured at a frequency of 30 Hz for 6 sec (i.e. 3 stretch cycles) |
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| High speed camera lens - Micro-NIKKOR 55mm f/2.8 - lens | Nikon | JAA616AB | to monitor the stretch during culture; time-lapse photographs of the scaffolds are captured at a frequency of 30 Hz for 6 sec (i.e. 3 stretch cycles) |
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| Hose clip | ibidi GmbH | 10821 | block medium flow (autoclave at step 1, step 7) |
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| Hydraulic reservoir with 8 screw threads for 8 flow culture chambers | Custom made, Department of Biomedical Engineering, Eindhoven University of Technology | n.a. | to apply pressure to the silicone mounted constructs (clean outside with a paper tissue with 70% ethanol, rinse reservoir with 70% ethanol followed by demi water, at step 1 and 7) |
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| Ibidi pump system (8x) including ibidi pump, PumpControl software, fluidic unit, perfusion set (medium tubing), air pressure tubing, drying bottles with orange silica beads | ibidi GmbH | 10902 | set up used to control the flow in the flow culture chambers. Note 1: the ibidi pumps were modified by the manufacturer to enable 200 mbar capacity. Note 2: can be replaced by pump system of other manufacturer, as long as same flow regimes can be applied. |
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| Knives (no.10 sterile blades, individual foil pack) and scalpel handle (stainless steel, individually wrapped) | Swann Morton | 0301; 0933 | to cut the silicone tubing in the correct size for the scaffold and to cut the suture material |
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| LabVIEW Software | National Instruments | version 2018 | to control the stretch applied to the scaffolds |
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| Laminar flow biosafety cabinet with UV light | Labconco | 302310001 | to ensure sterile working conditions. The UV is used to decontaminate everything that cannot be autoclaved, or touched after autoclaving |
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| Large and small petri dishes | Greiner | 664-160 | for sterile working conditions |
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| L-ascorbic acid 2-phosphate (vitamin C) | Sigma | A8960 | cell culture medium supplement, important for collagen production |
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| LED light cold source KL2500 | Zeiss | Schott AG | to aid in visualization for the time lapse of the scaffolds during monitoring of the stretch |
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| Luer (female and male) locks and connectors, white luer caps | ibidi GmbH | various, see (https://ibidi.com/26-flow-accessories) | to close or connect parts of the bioreactor and the ibidi pump (autoclave at step 1, step 7) |
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| Measuring amplifier (PICAS) | PEEKEL instruments B.V. | n.a. | to amplify the signal from the pressure sensor and feedback to LabView |
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| Medium reservoir (large syringes 60 mL) and reservoir holders | ibidi GmbH | 10974 | medium reservoir (autoclave at step 1, step 7) |
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| Medium tubing with 4.25 mm outer diameter and 1 mm inner diameter | Rubber BV | 1805 | to allow for a larger flow rate, the ibidi medium tubing with larger diameter is used. Note: the part of medium tubing guided through the fluidic unit valves are the same as the default ibidi medium tubing |
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| Motion Studio Software | Idtvision | 2.15.00 | to make the high speed time lapse images for stretch monitoring |
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| Needle (19G) | BD Microlance | 301700 | together with thin flexible tubing used to fill the hydraulic reservoir with ultrapure water without adding air bubbles |
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| Needle driver | Adson | 2429218 | to handle the needle of the nylon suture through the silicone tube (autoclave at step 1, step 7) |
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| Paper tissues | Kleenex | 38044001 | for cleaning of the equipment with 70% ethanol |
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| Parafilm | Sigma | P7793-1EA | quick fix if leakage occurs |
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| Penicillin/streptomycin (P/S) | Lonza | DE17-602E | cell culture medium supplement; prevent bacterial contamination |
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| Phosphate Buffered Saline (PBS) | Sigma | P4417-100TAB | for storage and washing steps (autoclave at step 1) |
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| Plastic containers (60 mL) with red screw caps | Greiner | 206202 | to prepare the fibrinogen solution |
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| Pneumatic cylinder | Festo | AEVC-20-10-I-P | to actuate the Teflon bellow (clean with a paper tissue with 70% ethanol at step 1 and 7) |
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| Polycaprolactone bisurea (PCL-BU) tubular scaffolds (3 mm inner diameter, 200 µm wall thickness, 20 mm length) | SyMO-Chem, Eindhoven, The Netherlands | n.a. | produced using electrospinning from 15% (w/w) chloroform (Sigma; 372978) polymer solutions. See Van Haaften et al Tissue Engineering Part C (2018) for more details |
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| Pressure conduit without holes (for static control) | Custom made, Department of Biomedical Engineering, Eindhoven University of Technology | n.a. | to mount electrospun tubes on silicon tubing (autoclave at step 1, step 7) |
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| Pressure sensor and transducer | BD | TC-XX and P 10 EZ | the air pressure going to the pneumatic actuated pump is raised until it reaches the set pressure |
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| Proportional air pressure control valve and pressure sensor | Festo | MPPES-3-1/8-2-010, 159596 | provides compressed air to the pneumatic actuated pump |
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| Roswell Park Memorial Institute 1640 (RPMI-1640) | Gibco | A1049101 | cell culture medium for monocyte/macrophage |
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| Safe lock Eppendorf tubes (1.5 mL) | Eppendorf | 30120086 | multiple applications (autoclave at step 1) |
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| Sodium dodecyl sulfate solution 20% | Sigma | 5030 | Used to clean materials, at a concentration of 0.1%. |
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| Silicone O-rings | Technirub | 1250S | to prevent leakage (autoclave at step 1, step 7) |
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| Silicone tubing (2.8 mm outer diameter, 400 um wall thickness) | Rubber BV | 1805 | to mount the electrospun tubes on the pressure conduits (autoclave at step 1) |
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| Sterile tube (15 mL) | Falcon | 352095 | multiple applications |
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| Suture, 5-0 prolene with pre-attached taper point needle | Ethicon, Johnson&Johnson | EH7404H | Prolene suture wire 5-0 (75cm length, TF taper point needle, 1/2 circle, 13 mm needle length) |
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| Syringe (24 mL) | B. Braun Melsungen AG | 2057932 | to add the ultrapure water or medium to the hydraulic reservoir or flow culture chamber |
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| Syringe filter (0.2 µm) | Satorius | 17597-K | to filter the fibrinogen solution |
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| T150 cell culture flask with filter cap | Nunc | 178983 | to degas culture medium |
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| T75 Cell culture flask with filter cap | Nunc | 156499 | to culture static control samples |
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| Teflon bellow | Custom made, Department of Biomedical Engineering, Eindhoven University of Technology | n.a. | to load the hydraulic reservoir (clean outside with a paper tissue with 70% ethanol at step 1 and 7) |
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| Tray (stainless steel) | PolarWare | 15-248 | for easy transport of the fluidic culture chambers and the bioreactor from incubator to laminar flow cabinet and back (clean with a paper tissue with 70% ethanol before and after use) |
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| Tweezers | Wironit | 4910 | sterile handling of individual parts (autoclave at step 1 and 7) |
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| Ultrapure water | Stakpure | Omniapure UV 18200002 | to correct for medium evaporation, mixed with aqua stabil mixed and used as hydraulic fluid. (autoclave ultrapure water at step 1) |
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| UV light | Philips | TUV 30W/G30 T8 | for decontamination of grafts and bioreactor parts before seeding |
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