Virtually any cellular process that depends on the transfer of molecules or information across the cell membrane, like cell signaling or cell excitation, requires membrane proteins. Thus, the reconstitution of membrane proteins has become the main bottleneck in realizing various synthetic cell designs for different applications. Traditional detergent-mediated reconstitution of membrane proteins in biological membranes requires GUV generation methods such as gentle swelling or electroformation. Swelling approaches usually produce small-sized vesicles, and electroformation yield significantly drops when complicated solutions, which is often the case when generating synthetic cells, are encapsulated32. Additionally, detergents solubilize the membrane protein, and their removal during the reconstitution process can cause protein misfolding33,34. On the other hand, the approach presented here relies on the cotranslational incorporation of the membrane protein into the lipid bilayer, which resembles more the natural protein biogenesis pathway in cells22.
From a technical point of view, the presented protocol is advantageous to other common encapsulation methods, such as electroformation and continuous droplet interface crossing encapsulation7,8,35,36 (cDICE), for easier implementation as the only laboratory equipment required for GUV generation is a centrifuge. As opposed to electroformation, the inverted emulsion method allows the encapsulation of different combinations of molecules with various concentrations. Additionally, compared to the original inverted emulsion technique25, this approach generates more stable GUVs that are suitable for encapsulation of CFE lysates or PURE systems. The higher GUV stability is owed to the presence of diblock copolymer in the composition of GUV membrane37 as well as the long incubation of the oil-water interface that allows the interface to be saturated with lipid molecules. Lastly, as opposed to microfluidics approaches, the protocol presented here does not require small channels and tubing. Therefore, the CFE reaction can be encapsulated as soon as it is assembled, and the shorter time of GUV assembly due to lack of flow and possible clogging prevents premature start of the CFE reaction. While the demonstration of membrane protein expression in this protocol is exclusive to PUREfrex reactions, one can extend this method to synthesize proteins using different available CFE systems, such as lysate-based bacterial or mammalian CFE systems.
The presented approach here has limitations that are caused by the oil-dependent nature of the GUV formation process and the intent to have stable GUVs. This approach is typically longer compared to other methods, such as cDICE or microfluidics, due to the long incubation time of the oil-water interface that is required for interface stabilization and high GUV yield. Additionally, lipid composition is primarily limited to POPC with small doses of other lipids or block copolymers, while other methods, such as electroformation, are more suited for the incorporation of lipids with different physical and chemical properties. While the GUV membrane composition in this method is a mixture of POPC and PBD-PEO to maximize CFE yield, possible variations in GUV membrane composition can be tested. However, further optimization of the parameters might be required for other membrane proteins. Since the droplet emulsification occurs through manual pipetting, the GUVs generated via this method are polydisperse and quite heterogeneous in size. Further, the fact that lipids are dissolved in the organic phase may occasionally cause a layer of oil between the two leaflets of the GUV membrane or contaminate the imaging chamber with oil that can be detrimental to image quality. A possible workaround for the challenge of residual oil is to replace mineral oil with a volatile organic solvent, such as diethyl ether, as shown by Tsumoto et al.38, to rely on solvent evaporation along with centrifugation during GUV formation.
While there is no demonstration of channel function in this work, inspired by previous assays used for probing reconstituted mechano- or light-sensitive channel functionality, a fluorescence microscopy-based assay is outlined. The opening of the GluR0 channel is reported to increase the membrane conductivity for K+ ions24. Because CFE reactions already contain a high concentration of K+, typical potassium indicators will not be suitable for assessing channel functionality. However, because potassium influx changes the membrane potential, sensitive membrane potential indicators such as DiBAC4(3)22 or BeRST 139 could report GluR0 activity in the presence of glutamate.
Successful reconstitution of membrane proteins in synthetic cells opens up numerous possibilities for creating synthetic cells with unprecedented abilities that more closely mimic natural cells. A current major disadvantage of synthetic cells is their inability to reproduce and recycle energy. However, with light- and chemical-dependent energy regeneration schemes that rely heavily on membrane proteins, one can envisage long-lasting synthetic cells40. Utilizing CFE systems allows the reconstitution of multiple membrane proteins that can collectively perform certain tasks. For instance, reconstitution of a ligand-gated ion channel similar to GluR0 described here, along with different voltage-gated ion channels, can lead to the construction of an excitable neuron-like synthetic cell.