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Method Article

Isolation of Primary Human Proximal Tubule Epithelial Cells and Their Use in Creating a Microphysiological Model of the Renal Proximal Tubule

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DOI:

10.3791/67997

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May 9th, 2025

 ,  ,  ,  ,  , 

* These authors contributed equally

In This Article

Summary

We present an optimized protocol for processing whole human kidneys to isolate and culture primary renal proximal tubule epithelial cells and the application of these cells in a three-dimensional, microfluidic, microphysiological platform to recapitulate the renal proximal tubule.

Abstract

Kidney disease affects over 850 million people globally, including 37 million Americans. Risk factors for chronic kidney disease include environmental influences, genetic predispositions, co-existing medical conditions, and a history of acute kidney injury. These factors often take months or years to develop, complicating longitudinal studies of disease etiology and pathophysiology. Advanced kidney models are needed to improve our understanding of disease mechanisms and enhance nephrotoxicity prediction in drug development. Proximal tubule epithelial cells (PTECs) in the kidney play a critical role in xenobiotic and toxin clearance as well as the reabsorption of essential nutrients. We have previously demonstrated that three-dimensional (3D) microphysiological system (MPS) platforms, populated with isolated primary PTECs, can be used to investigate renal drug interactions, assess nephrotoxicity of compounds, and predict drug clearance. Here, we present protocols for isolating and culturing primary PTECs from whole human kidneys and for seeding them into a 3D MPS platform that mimics in vivo renal physiology. This protocol enables long-term studies supporting PTEC viability, physiological morphology, and functional polarization of key transporter proteins in MPS devices for up to 6 months.

Introduction

The kidney plays a critical role in the clearance and elimination of a wide array of xenobiotics, toxins, and endogenous compounds from the body. This is achieved by filtering blood to remove waste products and by regulating electrolyte balance, fluid levels, and pH. Each human kidney contains around one million nephrons, the structural and functional units of the kidney1. Within these nephrons, specialized epithelial cells in the proximal tubules, known as proximal tubule epithelial cells (PTECs), are responsible for reabsorbing essential molecules such as glucose, amino acids, and ions, as well as for secreting drug substrates and potentially....

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Protocol

All work was conducted in compliance with the University of Washington's human tissue handling guidelines. Suitable donors meet the following requirements: less than 36 h of cold ischemic time (CIT), no known history of kidney diseases, dialysis, or any other medical conditions (e.g., diabetes mellitus type 1 or 2, hepatitis B, hepatitis C, human immunodeficiency viruses (HIV), viral/bacterial meningitis, methicillin-resistant Staphylococcus aureus infection, syphilis, sepsis, or Covid-19). The whole human kidneys used in this study were sourced through a UNOS-approved OPO.

1. Biosafety cabinet preparation

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Results

Morphology and confluency of isolated primary PTECs over time in 2D culture
Following isolation from the kidney cortex, PTECs were allowed to grow undisturbed for at least 48 h before the first media change. Approximately a week after culturing the cells, small batches of PTECs should appear throughout the culture flask with a uniform epithelial, cobblestone-like morphology (Figure 1A,B). Depending on the growth rates of PTECs from different donors, cell.......

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Discussion

MPS, or organ-on-a-chip technologies, offer a highly relevant in vitro platform to recapitulate key aspects of human physiology, thereby reducing the reliance on animal models in drug development and toxicological assessments. Recently, the FDA Modernization Act 2.0 (2022) has allowed the inclusion of MPS, among other alternatives, in Investigational New Drug applications29. This protocol details a standard operating procedure for the dissociation of PTECs from human donor cortical tissue.......

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Disclosures

The authors declare that they have no conflicts of interest or financial disclosures relevant to this study.

Acknowledgements

Portions of this work were supported by the NASA contract 80ARC023CA001, the National Center for Advancing Translational Sciences (NCATS) (U2CTR004867, UH3TR000504, UG3TR002158), jointly by the NCATS and the Center for the Advancement of Science in Space (CASIS) (UG3TR002178), the National Institute of Environmental Health Sciences (NIEHS) (P30ES00703), The National Institute of General Medical Sciences (T32GM007750), an unrestricted gift from Northwest Kidney Centers to the Kidney Research Institute, and the School of Pharmacy at the University of Washington (Ji-Ping Wang Award and Bradley Fellowship).

....

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
1 mL Luer-Lok Tip SyringesBecton, Dickinson309628
1.5 mL microcentrifuge tubesCELLTREAT Scientific Products229442
15 mL sterile conical polypropylene tubeFisher Scientific14-959-53A
3D microphysiological DeviceNortisTCC-001
5 mL Luer-Lok Tip SyringesBecton, Dickinson309646
50 mL sterile conical polypropylene tubeFisher Scientific12-565-271
Antibiotic-Antimycotic (100x)ThermoFisher Scientific15240062
Collagenase, Type IV, powderThermoFisher Scientific17104019
D-(+)-GlucoseMilliporeSigmaG8270
Defined Trypsin InhibitorThermoFisher ScientificR007100
Dimethyl sulfoxide, Bioreagent, Thermo Scientific ChemicalsThermoFisher ScientificJ66650-AK
Dispase II, powderThermoFisher Scientific17105041
Dulbecco’s MEM (DMEM)/F-12 w/o GlucoseUS Biological Life SciencesD9807-02
Dulbecco's Phosphate Buffered Saline (DPBS), calcium, magnesiumThermoFisher Scientific14040117
Fetal Bovine Serum (FBS), PremiumThermoFisher ScientificA5670701
Finnpipette F2 Good Laboratory Pipetting (GLP) KitsThermoFisher Scientific05-719-511Micropipettes
Fisherbrand SureOne Micropoint Pipette Tips, Universal Fit, Non-FilteredFisher Scientific02707407, 02707410, 02707438
Fresh whole human kidneyNovabiosishttps://www.novabiosis.com/research-organ-allocation-services/Human kidneys were obtained through Novabiosis, a UNOS-approved OPO
Humidified incubator (37 °C and 5% CO2)Fisher Scientific51033556
HydrocortisoneMilliporeSigmaH0888
Incubating Orbital ShakerAvantor12620-946
Insulin-Transferrin-Selenium (100X) (ITS -G)ThermoFisher Scientific41400045
Internal Thread Cryogenic VialsCorning430487
Kimtech Science KimwipesKimberly-Clark Professional34120
Luer Stubs (Blunt needle), 22 G x 0.5 inchesInstech Laboratories, Inc.LS22
Medium 199, Earle's Salts (10x)ThermoFisher Scientific21180021
Megafuge 8 Small Benchtop CentrifugeThermoFisher Scientific75007210
Metal Coupler (blunt)Instech Laboratories, Inc.SC 20/15
Mr. Frosty Freezing ContainerThermoFisher Scientific5100-0036
Nikon Eclipse Ti-S MicroscopeNikon Instrumentshttps://www.thelabworldgroup.com/product/nikon-eclipse-ti-fluorescent-microscope/Original model discontinued 
Nunc Non-treated Flasks, T-25ThermoFisher Scientific169900
Nunc Non-treated Flasks, T-75ThermoFisher Scientific156800
Pipette, 10 mL, Graduated, 1/10 mL, SterileGreiner Bio-One607180
Silicon tubing, C-flex tubing, (ID: 0.020", OD: 0.083")Cole-Parmer06422-00
Single edge razor blade (sterile)BiosealKI-205/50
Sodium BicarbonateMilliporeSigmaS6297
Sodium HydroxideMilliporeSigmaS8045
Sterile Disposable Filter Units with PES MembranesThermoFisher Scientific567-0020
Tissue Culture Treated Dishes, 150 mm  x 20 mm VentedGenesee Scientific25-203
Trypsin-EDTA (0.05%), phenol redThermoFisher Scientific25300054
Type I collagen, rat tailCorning354236
Type IV Collagen, MouseCorning354233

References

  1. Bertram, J. F., Douglas-Denton, R. N., Diouf, B., Hughson, M. D., Hoy, W. E. Human nephron number: implications for health and disease. Pediatr Nephrol. 26 (9), 1529-1533 (2011).
  2. Zhang, X., et al. Tubular secretion of creatinine and kidney function: an observational stu....

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