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Method Article

Whole Mount Immunostaining of Fetal and Neonatal Mouse Ovaries

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DOI:

10.3791/69455

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April 28th, 2026

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In This Article

Summary

This protocol describes a method for whole mount immunolabeling of developing mouse ovaries, with applications to other small tissues.

Abstract

The ovarian reserve consists of the oocytes available to a female for reproduction and are found in primordial follicles, each containing one oocyte surrounded by several granulosa cells. The oocytes start out as primordial germ cells that form outside the gonad and migrate to the developing ovary during embryonic development. Once they reach the ovary, they become oogonia and divide by mitosis, with incomplete cytokinesis, forming clusters of interconnected cells called germ cell cysts. While in cysts, the cells enter meiosis and become oocytes. In the mouse, two days before birth, the cysts begin to break apart, and each oocyte is packaged into a primordial follicle. Only some of the oocytes survive during this process, the rest undergo apoptosis. The regulation of cyst breakdown and primordial follicle formation is only partially understood, and identifying the molecules involved is crucial to understanding this process. Whole mount immunostaining of developing mouse ovaries can be used to determine the localization of potential regulatory molecules and to assess effects on primordial follicle formation due to mutation or other molecular changes using oocyte and somatic cell markers. Ovaries are harvested from fetal or neonatal mice, fixed in formaldehyde, and blocked. The ovaries are then exposed to antibodies against a protein of interest, followed by secondary antibodies conjugated to a fluorescent tag that detect the primary antibodies. Finally, the ovaries are mounted and examined by confocal microscopy. This procedure can detect multiple proteins of interest and can be applied to other small tissues, such as fetal mouse testes.

Introduction

Whole mount immunostaining combined with confocal imaging is a powerful method for analyzing protein expression and cell morphology in small tissues without sectioning1. In this method, tissues are first harvested, fixed, and blocked, and then exposed to antibodies against proteins of interest. The antibodies are either directly conjugated to fluorophores or followed by labeling with secondary antibodies conjugated to fluorophores that recognize the primary antibodies. The tissue is then incubated with the fluorescent dye, 4',6-diamidino-2-phenylindole (DAPI) to visualize cell nuclei. This step is important to provide spatial orientation wh....

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Protocol

All procedures using mice were reviewed and approved by the Syracuse University Institutional Animal Care and Use Committee (IACUC). The following protocol is for labeling neonatal mouse ovaries on post-natal days 1–5 (see Figure 1 for schematic). The reagents and the equipment used are listed in the Table of Materials.

1. Harvesting and fixing ovaries

  1. Euthanize neonatal C57BL/6 mice following the National Institutes of Health’s “Guide for the Care and Use of Laboratory Animals” and IACUC-approved animal protocols. Dissect ovaries in 1x phosp....

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Results

Typical results from the immunostaining method described here are shown. Images in Figure 3, Figure 4, Figure 5, and Figure 6 were taken on a spinning disk confocal microscope using a 40x oil objective, NA 1.3, with an exposure time between 100–250 ms and laser power between 0.01 and 0.1%. In Figure 3, neonatal mouse ovaries are labeled with antibodies agai.......

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Discussion

This report describes a method to fluorescently label whole ovaries for proteins of interest. This procedure has been extensively used to determine the expression of proteins during primordial follicle formation and also to characterize changes in follicle formation under different conditions4,5,6,7,8,9,

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Disclosures

The authors have nothing to disclose.

Acknowledgements

Imaging was performed in the Blatt Imaging Center at Syracuse University. The images in Figure 7 were obtained from a Zeiss LSM980 with Airyscan2 supported by NIH S10 OD026946-01A1. This work was supported by grants R03 HD102016 and R21 HD112756 from the NIH (to MEP). 

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
anti Human VASA (made in goat)R&DAF2030
anti-DDX4/MVH (made in rabbit)Abcamab13840
anti-GCNA1/TRA98 (made in rat)Abcamab82527
Bovine Serum Albumin (BSA)FisherBP-1600
Cover slips 22 x 22 #1.5Warner Instruments64-0721
DAPI (powder)Sigma AldrichD-9542prepare a 5 mg/ml solution in dH2O
Dissection scope
Donkey anti-Goat Alexa 568InvitrogenA11057
Donkey anti-Mouse Alexa 488InvitrogenA21202
Donkey anti-Rabbit Alexa 568InvitrogenA10042
Donkey anti-Rabbit Alexa 647InvitrogenA31573
Donkey anti-Rat Alexa 488InvitrogenA21208
Ethanol 200 proofPharmco111000200
Fine Scissors - SharpFine Science Tools14060-09for fine work removing ovary and trimming excess tissue
Forceps (Dumont Tweezer, Style 5)Electron Microscopy Science72705-01 (0209-5-PO)
Goat anti-Rabbit Alexa 488InvitrogenA11008
Microcentrifuge Tubes 1.5 mLThermo Scientific3451PK
Microscope SlidesFisherbrand12-550-123
Nutating MixerLabNetS0500
Paraformaldehyde 16%Electron Microscopy Science15710
Petri Dishes 100 x 15 mmBioplast Manufacturing940-10774
Phosphate Buffered Saline 1X(Fisher) S271-1;          (Sigma) P9541-500G; (Fisher) BP332-500; (Fisher) P285-500800 mL MQ H2O               80 g NaCl                     2.0 of KCl                         14.4 g Na2HPO4          2.4 g KH2PO4          Adjust pH to 7.4 with HCl; final volume 1 L Then dilute from 10X to 1X for use
Pin holderFine Science Tools26016-12to hold straight needle bent in a slight curve
Pipette Filter TipsOneTip(10uL) 1121-3810;              (20 uL) 1120-1810;          (200 uL) 1120-8810;     (1000 uL XL) 1122-1830
Pipette tipsOneTIp(10 uL) 1111-3800;          (200 uL) 1111-1800;     (1250 uL) 1112-1820
Pipettes 0.2-2, 2-20, 20-200, 100-1000Gilson(0.1-2 uL) F144054M;    (2-20 uL) F144056M;   (20-200 uL) F144058M;    (100-1000 uL) F144059M
Propidium iodide, 1mg/ml in dH2OInvitrogenP3566
RNase A powderSigma AldrichRG513-50mgprepare a 10 mg/ml solution in 0.1 M sodium acetate (pH 5.2). Heat to 100 oC for 15 min. Cool to RT and adjust pH by adding 0.1 volume of 1 M Tris-Cl (pH 7.4)
Straight Needlestraight needle bent into a curve for severing excess tissue from the ovary
Triton X-100Thermo ScientificX100-100ML
Tuberculin Syringe 28G x 1/2Tyco/Healthcare Kendall Monoject1180128012
VectashieldVector LabratoriesH-1900
Wagner ScissorsFine Science Tools14068-12For decapitation, and larger cuts
Wide bore pipette tip 20 ulLabCon1026-965-008-9

References

  1. Wong, F. C. K. Whole-mount immunofluorescence staining of early mouse embryos. Methods Mol Biol. 2214, 143-155 (2021).
  2. Monk, M., McLaren, A. X-chromosome activity in foetal germ cells of the mouse. J Embryol Exp Morphol. 63, 75-84 (1981).
  3. Pepling, ....

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