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Method Article

Immunostaining and Dye Penetration Experiments to Define Core Pleated Septate Junction Proteins in Drosophila Embryonic Epithelia

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DOI:

10.3791/69986

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February 27th, 2026

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In This Article

Summary

These protocols outline how to characterize the organization and occluding function of pleated septate junctions in control and mutant Drosophila embryonic epithelia.

Abstract

The purpose of these protocols is to evaluate the organization and barrier function of pleated Septate Junctions (pSJs) in the ectodermally-derived epithelial tissues of Drosophila embryos. pSJ form an occluding barrier on the lateral membrane of ectodermal tissues including the epidermis, salivary glands, trachea, and hindgut that is functionally similar to the tight junction in vertebrate tissues. In Drosophila, 30 proteins have been identified that are required for the formation of pSJs. Core pSJ proteins are initially localized along the length of the lateral membrane but become strongly enriched at the apical lateral region of the junction, just basal to the adherens junction, by stage 16 of embryogenesis. By late stage 15 of embryogenesis, these tissues possess a fully functional occluding junction. This paper will describe immunostaining and dye permeability protocols that can be used to interrogate the organization and function of pSJs in control and mutant embryos. Successful employment of these protocols can be used to demonstrate the occluding function of pSJs, and to test whether an unknown gene encodes a core component of the junction.

Introduction

A critical function of epithelial tissues is to compartmentalize distinct regions within an organism. Creation of these distinct environments is essential for organ function and for protecting the organism from external threats. The occluding junction formed between the cells of an epithelium is responsible for establishing and maintaining these environments by preventing the paracellular flow of solutes between the apical and basal sides of that epithelium1,2. In vertebrate organisms, the occluding junction is referred to as the tight junction, whereas it is referred to as the septate junction (SJ) in inverte....

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Protocol

1. Staging of embryos

  1. Cross healthy male and female flies of the appropriate genotypes (see Table of Materials for examples) and place them in embryo collection cages with fresh apple juice plates smeared with yeast paste. Let the flies acclimate to egg collection cages for a day or two before starting embryo collections.
  2. Collect embryos on apple juice plates and allow them to develop to stage 16 (~13 h after egg laying (AEL) to 16 h AEL at 25 °C). Allow the adults to lay fertilized eggs for 1-2 h on apple juice plates, remove the plate from the egg collection cage, and then age them to 13-16 AEL at 25 °C. Alternatively....

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Results

The protocols presented here are used to investigate the organization and function of pSJs in ectodermal tissues in stage 16 Drosophila embryos. These protocols are only applicable to pSJs and cannot be used to interrogate sSJs. A mutation in a gene that results in failure to localize other pSJ proteins to the pSJ region in stage 16 embryos and to create an occluding junction at stage 16 is either in a core pSJ gene or an accessory pSJ gene. The main distinction between the two is whether the encoded protein is subcellul.......

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Discussion

Here we present a protocol to identify core and accessory pSJ proteins using two relatively simple assays that can be achieved in modestly appointed labs with fluorescence microscopy capabilities. The first assay examines the molecular organization of the pSJ in mature polarized epithelia using confocal imaging of fixed mutant embryos. The second assay tests the integrity of the pSJ's occluding function by injecting dye-labeled 10 kDa dextran molecules into stage 16 living embryos. The simplicity of these protocols a.......

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Disclosures

The authors have no conflicts of interest to disclose.

Acknowledgements

We thank the Bloomington Drosophila Stock Center for the fly stocks used in this study. We thank the Developmental Studies Hybridoma Bank for antibodies used in the study. We also thank the Department of Biology at Case Western Reserve University for the use of their Leica MZ10F fluorescence stereomicroscope for genotyping and staging embryos for dissection and their DMi8 inverted fluorescence microscope for the dye injection experiments. We thank Helen Salz, Professor of Genetics and Genome Science, CWRU School of Medicine for providing the micromanipulator and for pulling several of the needles used in the dye injection experiment presented in this study. This proje....

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
Capillary tube for needles (Boro 1 X 0.5/Fiber )FHC30-30-1
Confocal microscopeLeicaStellaris 5 
Cover glass 22 x 22 2 thickness for injectionsFisher Scientific12-540-B
Cover glass 22 x 30 1.5 thickness for imagingCorning2980-233
Culture tube for immunostaining (6 x 50 mm) Fisher Scientific14-958-A
Embryo collection cageGenesee Scientific59-100
Fluorescence stereomicroscopeLeicaMZ10 F
Halocarbon oil (700)Genesee Scientific59-131
HeptaneFisher ScientificH350-4
Inverted fluorescence microscopeLeicaDMi8
Mesh baskets for dechorionating embryosGenesee Scientific46-101
MethanolFisher ScientificA412-4
MicromanipulatorNarishigeMN151
Microscope slidesFisher Scientific12-544-2
Needle pullerDavid Kopf instrumentsmodel 720
Normal Donkey SerumJackson ImmunoReseaerch017-000-121
Nylon mesh (120 um)Genesee Scientific57-102
Objective lens HC PL FLUOTR 10X/0.32 PH 1Leica11506537
Objective lens HC PL APO 10x/0.40 CS2Leica15506407
Objective lens HC PL APO 40x/1.30 CS2Leica15506358
Petri plates 60 x 15 mmCorning351007
Platform rockerGlobe ScientificGTR-FS
Primary antibody (Coracle)DSHBC566.9
Primary antibody (Coracle)DSHBC615.16
Primary antibody (E cadherin)DSHBDCAD2
Primary antibody (Mcr)Ward lab, CWRUguinea pig polyclonal
Rhodamine labeled 10 kDa dextranMolecular ProbesD1824
Secondary antibody (donkey anti-guinea pig Cy3)Jackson ImmunoReseaerch706-165-148
Secondary antibody (donkey anti-mouse Cy2)Jackson ImmunoReseaerch715-225-151
Secondary antibody (donkey anti-rat Cy5)Jackson ImmunoReseaerch712-175-150
Table top shakerNew Brunswick ScientificC2 platform shaker
Tegosept (methyl 4-hydroxybenzoate)TCIH0216
Triton X-100Fisher ScientificBP151500
Vials for fixation (20 ml WHEATON liquid scintillation vials)Fisher Scientific03-341-73C
Whatman 3MM  Chromatography PaperFisher Scientific05-716-6H
Fly stocksFull genotypestock numberSource
cor4w*; P{neoFRT}43D cora4/CyO52232BDSC
w1118w[1118]5905BDSC
SolutionRecipe
10x PBSMix 90 g of NaCl, 20 g of Na2HPO4, and 8.3 g of NaH2PO4.H2O and dH20 to 1L. Filter sterilize. Dilute to 1X with dH2O for washing steps in immunostaining.
10% Triton X-100 solutionMix 1 ml of Triton X-100 to 9 ml of dH2O on a platform rocker until dissolved. Store at room temperature.
50% bleachMix 10 ml of commercial bleach (7.5% sodium hypochlorite) to 10 ml of water prior to dechorionating embryos.
Apple juice platesBoil 15 g Drosophila agar in 725 ml dH2O. Add 25 g sugar and 250 ml apple juice and mix until blended. Let the solution cool to 55 C and then add 1.3 g tegosept and gently mix. Pour into 60 x 15 petri plates and let cool. Store at 4 C.
Blocking solutionMix 9.8 ml of 1X PBS with 100 ul of 10% Triton X-100 and 100 ul of Normal Donkey Serum in a 15 conical tube.
Embryo wash solutionMake 10X embryo wash solution by mixing 70 g NaCl and 2 ml Triton X-100 to 1L of dH2O. Dilute to 1X with dH2O for working solution.
FixPreheat 10 ml of 1X PBS in the microwave. Add 0.4 g  of paraformaldehyde and pipet to mix. Add 10 ul of 14N NaOH to speed dissolving. Place on a 90 C heatblock until dissolved. Once no solid paraformaldehyde remains add 10 ul of 14N HCL to adjust pH to neutral. Always wear a lab coat, gloves and googles when using paraformaldehyde.
Mounting mediaMix 9 ml of glycerol and 1 ml of 1M Tris base pH 8.0. Add 0.05 g n-propyl-gallate,  mix and heat to dissolve. Aliquot 0.5 ml into eppendorf tubes. 
Rhodamine dextran solutionMake fresh dye solution by dissolving Rhodamine-labeled 10 kDa Dextran to 1 mg/ml in 0.5M Sodium Phosphate, pH 7.5 and 5 mM Potassium Chloride.
Yeast pasteMix 50 g of commercial yeast (Red Star) with a pinch of sucrose and enough water to make a thick paste. Store at 4 C.

References

  1. Farquhar, M. G., Palade, G. E. Junctional complexes in various epithelia. J. Cell Biol. 17, 375-412 (1963).
  2. Lord, B. A., DiBona, D. R. Role of the septate junction in the regulation of paracellular transepithelial flow. J. Cell Biol. 71 (3), 967-972 (1976).
  3. ....

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