This protocol describes a reproducible workflow for integrating PIVKA-II, AFP, and routine clinical variables into a logistic-regression diagnostic model for hepatocellular carcinoma, with validation in early-stage and AFP-negative disease.
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Research Article
This protocol describes a reproducible workflow for integrating PIVKA-II, AFP, and routine clinical variables into a logistic-regression diagnostic model for hepatocellular carcinoma, with validation in early-stage and AFP-negative disease.
Early detection of hepatocellular carcinoma (HCC) remains limited by the incomplete sensitivity of alpha-fetoprotein (AFP), especially in early-stage and AFP-negative tumors. This study evaluated whether abnormal prothrombin/protein induced by vitamin K absence-II (PIVKA-II), AFP, and routine clinical variables could be integrated into a reproducible diagnostic model for HCC. A retrospective training cohort of 205 participants, including 112 imaging-confirmed HCC cases and 93 non-HCC controls, was used for model development. An independent prospective validation cohort of 184 participants, including 58 HCC cases and 126 non-HCC controls, was used for out-of-sample testing without model refitting. Pre-imaging blood samples were used for AFP and PIVKA-II measurement, and clinical variables were extracted from the same diagnostic window. The final multivariable logistic-regression model combined ln(AFP), ln(PIVKA-II), age, sex, albumin, international normalized ratio, and platelet count. The combined model achieved an AUC of 0.93 in the training cohort and 0.89 in the validation cohort. In validation, sensitivity was 84.5% and specificity was 90.5%. Sensitivity remained 72.7% in early-stage HCC and 73.1% in AFP-negative HCC, exceeding AFP alone in both subgroups. Calibration and bootstrap validation supported acceptable model stability. These results show how PIVKA-II, AFP, and routinely available clinical variables can be combined into a practical diagnostic triage tool for high-risk liver disease populations.
Hepatocellular carcinoma (HCC) is a leading cause of cancer-related mortality and usually arises in patients with chronic liver disease, including hepatitis B virus infection, hepatitis C virus infection, alcohol-related liver disease, and metabolic dysfunction-associated steatotic liver disease1. Early detection is clinically important because curative treatment is most effective when tumors are found before vascular invasion, extrahepatic spread, or marked deterioration in liver reserve. Current surveillance strategies generally rely on liver ultrasound with or without serum alpha-fetoprotein (AFP)2. In routine practic....
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This study was reviewed and approved by the Ethics Committee of Affiliated Hangzhou First People's Hospital, School of Medicine, Westlake University. The approval number was IIT-20230528-0108-01. Written informed consent was obtained from prospectively enrolled participants before blood collection. For retrospectively included clinical records and archived leftover specimens collected during routine care, informed consent was waived by the ethics committee because de-identified data were used and no additional intervention was performed.
Reproducibility, bias control, and data integrity
Eligibi....
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Baseline characteristics
The final analysis included 389 participants. The training cohort included 205 participants, comprising 112 imaging-confirmed HCC cases and 93 non-HCC controls. The validation cohort included 184 participants, comprising 58 imaging-confirmed HCC cases and 126 non-HCC controls. Baseline characteristics are summarized in Table 1.
In the training cohort, the 93 non-HCC controls included 30 healthy controls and .......
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This study evaluated an integrated diagnostic strategy for HCC using PIVKA-II, AFP, and routine clinical variables, with attention to early-stage and AFP-negative disease14. Across the training and validation cohorts, the combined model outperformed single-marker testing. In the training cohort, the combined model achieved an AUC of 0.93, compared with 0.78 for AFP and 0.85 for PIVKA-II. In the independent validation cohort, the model retained strong discrimination, with an AUC of 0.89, sensitivit.......
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The authors declare no competing financial or non-financial interests. No commercial funder, reagent manufacturer, software provider, or diagnostic-platform company had any role in study design, data collection, statistical analysis, interpretation of results, manuscript preparation, or the decision to submit the work for publication.
The authors thank the study participants and the clinical staff who supported blood collection, clinical coordination, imaging review, and data verification for this study.
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| Name | Company | Catalog Number | Comments |
|---|---|---|---|
| 1.5 mL nuclease-free microcentrifuge tube | Eppendorf | 30123328 | Plasma aliquoting and storage |
| AFP calibrator | Roche Diagnostics | AFP CalSet II, 09227261190 | AFP calibration |
| AFP quality-control material | Roche Diagnostics | PreciControl Tumor Marker, 11776452160 | AFP quality control |
| AFP quality-control material | Roche Diagnostics | PreciControl Universal, 11731416160 | AFP quality control |
| AFP reagent kit | Roche Diagnostics | Elecsys AFP, 09015124190 | AFP measurement |
| Automated electrochemiluminescence immunoassay analyzer | Roche Diagnostics | cobas e 801 | AFP and PIVKA-II measurement |
| Calibration package | R package | rms 6.7–1 | Calibration analysis |
| Decision curve analysis package | R package | rmda 1.6 | Decision curve analysis |
| Hosmer–Lemeshow test package | R package | ResourceSelection 0.3–6 | Hosmer–Lemeshow test |
| K2-EDTA blood collection tube, 10 mL | BD | 367525 | Peripheral venous blood collection |
| Multiple-imputation package | R package | mice 3.16.0 | Multiple imputation |
| PIVKA-II reagent kit | Roche Diagnostics | Elecsys PIVKA-II, 08333629190/08333629500 | PIVKA-II measurement |
| Refrigerated centrifuge | Eppendorf | Centrifuge 5425 R | Plasma separation |
| ROC analysis package | R package | pROC 1.18.5 | ROC analysis and DeLong test |
| Statistical software | R Foundation | R 4.3.2 | Statistical analysis |
| Statistical software interface | Posit Software | RStudio 2023.12.1 | Statistical analysis |
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