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TOPICAL COLLECTIONS

Synthesis, Characterization and Applications of DNA-Lipid Conjugates

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Guest Editor

Ahanjit Bhattacharya

Ahanjit Bhattacharya

Stanford University

Ahanjit Bhattacharya is a postdoctoral researcher at the Department of Chemistry, Stanford University. During 2014-2020, Ahanjit carried out his doctoral research at the University of California San Diego. He worked on designing artificial cellular systems from fundamental building blocks. He also has a deep interest in understanding the origins and of life. Ahanjit's major accomplishments are the development of lipid compartments as programmable synthetic cells and organelles, and the development of minimal biochemical strategies for the synthesis of membrane-forming lipids. Currently, he is working on physical mechanisms of fusion of enveloped viruses with model lipid membranes using DNA-lipid conjugates as a key tool. He is also trying to understand structure-function relationships in complex archaeal lipids. He uses a host of biophysical tools which includes small-angle X-ray scattering, single-particle TIRF microscopy, and electron microscopy. 

Collection Overview

The pursuit of controlling biological processes and interactions lies at the heart of biomolecular engineering. DNA-lipid conjugates are versatile tools in this regard. These amphiphilic molecules embody two different self-assembling units – (1) nucleic acid moiety, which is capable of sequence-guided precise and programmable self-assembly, (2) lipid moiety, which allows insertion into a hydrophobic structure. Even though DNA-lipid conjugates do not occur naturally, they are used as convenient proxies for complex macromolecular interactions in living cells. DNA-lipid conjugates have found applications in cell membrane engineering, synthetic receptors, synthetic membrane architectures, biophysical model systems, biosensors, and therapeutic agents.

The primary goal of this methods collection is to expand the scope of DNA-lipid conjugates as robust molecular tools. A large number of potential users of DNA-lipid conjugates may be non-chemists or scientists with limited access to synthetic chemistry resources. Therefore, visual demonstrations of simplified procedures for synthesis and purification of these molecules using various conjugation and linker chemistries will be extremely desirable. DNA-lipid conjugates are widely used to impart programmability to self-assembled systems such as supported bilayers, liposomes, and nanoparticles. Video articles elaborating well-established model experiments in these areas will ensure reproducibility and enable novel applications. A few other focus areas in this collection will be – the physical characterization of the self-assembled aggregates formed by DNA-lipid conjugates, viral fusion models, cell-based applications, and bottom-up synthetic biology.

Abstracts

Formation process for DNA-tethered lipid membranes via solvent-assisted self-assembly

Minsub Chung*1

1Hongik University