
Protozoan parasites rank as the third leading cause of human mortality, making them a significant public health concern responsible for substantial productivity losses and imposing a heavy economic burden. Given the absence of effective vaccines and the emergence of drug-resistant parasites, identifying new drug targets and intervention strategies is of utmost importance. Understanding the biology of these parasites through functional genomic approaches could provide a key solution to this problem. This Methods Collection seeks to provide a repository of methods and protocols spanning various domains of functional genomics research.
We welcome methods for the functional knockout of gene(s), such as knockout through CRISPR-Cas9, knockdown via RNAi, di-Cre systems, inducible knockdown through ribozyme-mediated mRNA degradation, or destabilization-domain induced protein degradation. Additionally, we invite methods related to the overexpression of gene functions and surrogate models for deciphering gene functions.
For this thematic collection, we are also interested in methods for studying protein-protein interactions, genome-scale interactions between proteins and chromatin, and inter-chromosomal interactions. Computational tools, like programs based on R or Python, capable of analyzing the vast datasets produced by transcriptome or interactome studies, are also encouraged for this collection.