Error-prone Polymerase

An error-prone polymerase is a DNA-synthesizing enzyme that copies genetic material with lower fidelity than high-accuracy replicative polymerases, making it an important source of genetic variation and a subject of biological research. These enzymes often lack 3′→5′ proofreading activity or possess active sites that accommodate mismatched bases, allowing nucleotide misincorporation during replication or translesion synthesis across damaged DNA. In cells, this activity can promote adaptation while also increasing mutation burden. Researchers use error-prone polymerases and controlled mutagenesis systems to generate diverse gene variants, investigate DNA damage tolerance, and study how altered replication fidelity affects evolution and disease-related processes.

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JoVE Core - Molecular Biology
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Translesion DNA Polymerases

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2020

Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication. TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...

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JoVE Core - Molecular Biology

Eukaryotic RNA Polymerases

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2025

RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action. All three eukaryotic RNAPs require specific transcription factors, of which the...

Bacterial RNA Polymerase

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2020

Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity. In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...

Systematic Error: Methodological and Sampling Errors

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2024

In the case of systematic errors, the sources can be identified, and the errors can be subsequently minimized by addressing these sources. According to the source, systematic errors can be divided into sampling, instrumental, methodological, and personal errors. Sampling errors originate from improper sampling methods or the wrong sample population. These errors can be minimized by refining the sampling strategy. Defective instruments or faulty calibrations are the sources of instrumental...

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JoVE Core - Social Psychology
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Fundamental Attribution Error

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2020

According to some social psychologists, people tend to overemphasize internal factors as explanations—or attributions—for the behavior of other people. They tend to assume that the behavior of another person is a trait of that person, and to underestimate the power of the situation on the behavior of others. They tend to fail to recognize when the behavior of another is due to situational variables, and thus to the person’s state. This erroneous assumption is called the fundamental attribution...

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