Ffpe Fna Tumor Biopsies

FFPE FNA tumor biopsies are tissue or cellular specimens obtained by fine-needle aspiration (FNA) and preserved as formalin-fixed, paraffin-embedded (FFPE) samples for pathological and molecular analysis. During processing, aspirated tumor cells are fixed in formalin to stabilize cellular structures, embedded in paraffin, sectioned into thin slices, and stained or tested to characterize morphology and biomarker profiles. These minimally invasive specimens support tumor diagnosis, classification, and treatment planning when larger surgical biopsies are impractical. Their preserved material can also enable immunohistochemistry and genomic testing, helping researchers and clinicians connect microscopic findings with disease biology and therapeutic decisions.

Ffpe Fna Tumor Biopsies - Related Videos

Research

JoVE Journal - Medicine
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Performing and Processing FNA of Anterior Fat Pad for Amyloid

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Cited by 28 •

2010

Fat pad aspiration is a preferred, minimally invasive, and low cost approach as compared to other methods to detect amyloid for diagnosis of systemic amyloidosis. This video article demonstrates a procedural outline for performing fat pad aspiration with appropriate processing of the specimen for the optimal diagnostic outcome.

Research

JoVE EoE - Gastrointestinal Cancer

FFPE Tumor Tissue Macrodissection: A Technique to Obtain Specific Tumorous Tissue from Unstained Specimens

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2023

This video describes a method for the manual macrodissection of cancer tissue from unstained tissue specimens to obtain a specific cancer tissue. The tissue section can be processed further to obtain DNA for genome-wide studies on gastrointestinal cancers.

Research

JoVE Journal - Medicine
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Integration of Wet and Dry Bench Processes Optimizes Targeted Next-generation Sequencing of Low-quality and Low-quantity Tumor Biopsies

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Cited by 2 •

2016

An integrated system for targeted next-generation sequencing of oncology specimens is described. This cross-platform system is optimized for low-quality and low-quantity tumor biopsies, accommodates low DNA inputs, includes well-characterized multi-variant controls, and features a novel variant caller that is informed by quantitative pre-analytical quality control measures.

Research

JoVE Journal - Biology
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Preparation and Using Phantom Lesions to Practice Fine Needle Aspiration Biopsies

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Cited by 6 •

2009

Practicing of fine needle aspiration biopsies (FNAB) by trainees is relatively challenging, due to the lack of an easily available, appropriate lesion. Preparation of an AV phantom lesion for practicing the FNAB procedure and mastering proficiency is relatively easy.

Sampling Prostate Cancer Tissue for Biobanking: An MRI-guided Targeted Technique to Remove Biopsy Punches from Fresh Tumor Tissue

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2023

This video demonstrates an MRI data-based technique to target specific tumor-containing regions in prostate tissue for sampling. The collected biopsy specimens can be either stored for biobanking purposes or used for subsequent downstream analysis.

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