Extracellular Flux Assay

An extracellular flux assay is a live-cell method that measures changes in oxygen consumption and extracellular acidification to characterize cellular energy metabolism. In a microplate, sensor probes monitor oxygen and proton levels in the surrounding medium, while sequential additions of metabolic substrates, inhibitors, or uncouplers reveal mitochondrial respiration, glycolysis, and related parameters. In neuroscience, the assay helps researchers assess how neurons and glial cells produce and use energy, including mitochondrial function, glycolytic capacity, and responses to metabolic stress. These measurements support studies of brain development, neurodegeneration, injury, and potential treatments that alter cellular bioenergetics.

Extracellular Flux Assay - Related Videos

Research

JoVE EoE - Leukemia

Extracellular Flux Assay: A Method for Measuring Metabolic Profile of Cells

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2023

This protocol provides a biochemical approach for measuring extracellular acidification rate (ECAR) and oxygen consumption rate (OCR) of primary leukemic cells with extracellular flux assay. The assessment of the metabolic profile of these cells helps to characterize their demands, leading to personalized therapy.

Extracellular Flux Assay in 3D Spheroids: A Method for Measuring the Metabolic Activity of Pancreatic Tumor Spheroids

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2023

This protocol describes the technique for performing extracellular flux assay on 3D spheroids generated from the co-culture of pancreatic cancer cells (Patu8902) and activated pancreatic fibroblasts (PS1) to measure the two major energy-producing pathways, glycolysis and mitochondrial respiration.

Research

JoVE Journal - Developmental Biology
Free Sample

Assessing the Metabolic Activity of Whole Regenerating Zebrafish Ventricles Ex Vivo Using an Extracellular Flux Assay

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2026

In this article, we describe a detailed protocol for quantifying the oxygen consumption rate and extracellular acidification rate of ex vivo adult zebrafish ventricles to characterize their oxidative and glycolytic metabolic capacity.

Measurement of Extracellular Ion Fluxes Using the Ion-selective Self-referencing Microelectrode Technique

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Cited by 6 •

2015

Transporters in cell membranes allow differential segregation of ions across cell membranes or cell layers and play crucial roles during tissue physiology, repair and pathology. We describe the ion-selective self-referencing microelectrode that allows the measurement of specific ion fluxes at single cells and tissues in vivo.

Real-Time Monitoring of Energy Metabolism in Human NK Cells Using an Extracellular Flux Analyzer

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2025

This video demonstrates the method to analyze energy metabolism in activated human NK cells using an extracellular flux analyzer. Different inhibitors of the electron transport chain complexes impact ATP synthesis, which is measured through the oxygen consumption rate or OCR, providing insights into cellular metabolism and bioenergetics.

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