Lcg Software Toolbox

The LCG Software Toolbox is a collection of computational resources designed to support neuroscience research, where software helps transform complex data into interpretable results. Its workflow depends on the selected tool: researchers provide experimental or model-derived data, configure analysis parameters, execute computational procedures, and evaluate the resulting outputs through numerical summaries or visualizations. These tools can assist with organizing datasets, testing analytical approaches, and examining patterns relevant to neural systems and behavior. By connecting data processing with quantitative analysis, the toolbox supports reproducible research, strengthens interpretation of neuroscience experiments, and provides a practical foundation for integrating computational methods into laboratory and academic workflows.

Lcg Software Toolbox - Related Videos

Research

JoVE Journal - Developmental Biology

Morphometric Analyses of Shape: The Analysis Software Toolbox for Craniofacial Shape Quantification in Zebrafish

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2026

This work describes a protocol for quantifying craniofacial cartilage shape using free software (tpsDigs2, MorphoJ, and PAST) to measure changes in facial structure in zebrafish larvae.

Research

JoVE Journal - Bioengineering
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In Silico Modeling Method for Computational Aquatic Toxicology of Endocrine Disruptors: A Software-Based Approach Using QSAR Toolbox

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Cited by 13 •

2019

Quantitative structure-activity relationship (QSAR) modeling is a representative bioinformatics-assisted method in toxicological screening. This protocol demonstrates how to computationally assess the risks of endocrine disruptors (EDs) in aquatic environments. Utilizing the OECD QSAR Toolbox, the protocol implements an in silico assay for analyzing toxicity of EDs in fish.

VisualEyes: A Modular Software System for Oculomotor Experimentation

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Cited by 28 •

2011

Neural control and cognitive processes can be studied through eye movements. The VisualEyes software allows an operator to program stimuli on two computer screens independently using a simple, custom scripting language. The system can stimulate tandem eye movements (saccades and smooth pursuit) or opposing eye movements (vergence) or any combination.

A Neural Implant Design Toolbox for Nonhuman Primates

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Cited by 2 •

2024

This paper outlines automated processes for nonhuman primate neurosurgical planning based on magnetic resonance imaging (MRI) scans. These techniques use procedural steps in programming and design platforms to support customized implant design for NHPs. The validity of each component can then be confirmed using three-dimensional (3D) printed life-size anatomical models.

A MRI-Based Toolbox for Neurosurgical Planning in Nonhuman Primates

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Cited by 9 •

2020

The method outlined below aims to provide a comprehensive protocol for the preparation of nonhuman primate (NHP) neurosurgery using a novel combination of three-dimensional (3D) printing methods and MRI data extraction.

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