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JoVE Journal
Chemistry
Site Directed Spin Labeling and EPR Spectroscopic Studies of Pentameric Ligand-Gated Ion Channels
Site Directed Spin Labeling and EPR Spectroscopic Studies of Pentameric Ligand-Gated Ion Channels
JoVE Journal
Chemistry
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JoVE Journal Chemistry
Site Directed Spin Labeling and EPR Spectroscopic Studies of Pentameric Ligand-Gated Ion Channels

Site Directed Spin Labeling and EPR Spectroscopic Studies of Pentameric Ligand-Gated Ion Channels

Full Text
11,080 Views
11:19 min
July 4, 2016

DOI: 10.3791/54127-v

Sandip Basak1, Soumili Chatterjee1, Sudha Chakrapani1,2

1Department of Physiology and Biophysics,Case Western Reserve University, 2School of Medicine,Case Western Reserve University

This article describes methods for site-directed spin labeling and reconstitution of pentameric ligand-gated channels for Electron Paramagnetic Resonance studies. This protocol can be adapted for any membrane protein. The reconstitution method described here can also be used for patch-clamp measurements of macroscopic and single-channel currents in a defined lipid system.

The overall goal of this protocol is to demonstrate the purification, site directed spin labeling, and reconstitution of a penameric ligand-gated channel for electron paramagnetic resonance studies. Studying membrane protein dynamics in a physiologically relevant environment is crucial to fully understand how this membrane transport protein works. And because of these needs, I think site directed spin labeling and EPR technique is ideally suited.

The main advantage of this technique is that it's not limited by the size of the protein. Therefore, site directed spin labeling and EPR spectroscopy would be a technique of choice if you're wanting to study large protein dynamics or proteins reconstituted in membranes. Introduce single cysteine mutations in the GLIC gene by site directed mutagenesis.

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