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JoVE Journal
Biochemistry
High Precision FRET at Single-molecule Level for Biomolecule Structure Determination
High Precision FRET at Single-molecule Level for Biomolecule Structure Determination
JoVE Journal
Biochemistry
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JoVE Journal Biochemistry
High Precision FRET at Single-molecule Level for Biomolecule Structure Determination

High Precision FRET at Single-molecule Level for Biomolecule Structure Determination

Full Text
10,999 Views
11:24 min
May 13, 2017

DOI: 10.3791/55623-v

Junyan Ma1, Inna S. Yanez-Orozco2, Soheila Rezaei Adariani2, Drew Dolino3, Vasanthi Jayaraman3, Hugo Sanabria2

1Department of Chemistry,Clemson University, 2Department of Physics and Astronomy,Clemson University, 3Department of Biochemistry and Molecular Biology, Center for Membrane Biology, Graduate School for Biomedical Sciences,University of Texas Health Science Center

Summary

A protocol for high-precision FRET experiments at the single molecule level is presented here. Additionally, this methodology can be used to identify three conformational states in the ligand-binding domain of the N-methyl-D-aspartate (NMDA) receptor. Determining precise distances is the first step towards building structural models based on FRET experiments.

Transcript

The overall goal of this protocol is to perform high precision inter-dye distance measurements using multi-parameter fluorescence detection of F

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