A subscription to JoVE is required to view this content. Sign in or start your free trial.
Chapters
- 00:06Introduction
- 00:46I. Data Download
- 01:05II. Optimal Power Value Determination
- 02:38III. Construction of a Co-Expression Network and Module Identification
- 04:25IV. Preservation Test
- 05:44V. Correlation Analysis of the Module Membership
- 06:55VI. Analysis of the Microbial Flora in the Microbial Differential Network Module
- 07:43Resuts: Analysis of Differences in Rice delavayi Root Microbial Communities Based on Weighted Co‐Expression Network
- 09:18Conclusion
Network analysis was applied to evaluate the association of various ecological microbial communities, such as soil, water and rhizosphere. Presented here is a protocol on how to use the WGCNA algorithm to analyze different co-occurrence networks that may occur in the microbial communities due to different ecological environments.
