Name: Qualitative and Quantitative Analysis of Siderophore Production from Pseudomonas aeruginosa (Video) | JoVE Journal
Uploaded: 2024-03-15T13:00:00.000+00:00
Duration: 5 min 9 s
Description: Learn a simplified spectrophotometric protocol to quantify siderophores, pyoverdine, and pyochelin in Pseudomonas aeruginosa. This method enables reliable virulence factor analysis for bacterial iron acquisition research.

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Authors acknowledge funding from DBT - Biotechnology Teaching Program, DBT - BUILDER Program and FIST. MR thanks fellowship received from SHODH. HP thanks fellowship received from CSIR.

All bacterial isolates of P. aeruginosa were obtained from medical microbiology laboratories from Vadodara and Jaipur, India. All selected clinical isolates were handled in Biosafety Cabinet (BSL2) and utmost care was taken while handling bacterial isolates during the experiments. The commercial details of all the reagents/solutions are provided in the Table of Materials.
1. Preparation of Chrome Azurol Sulfonate (CAS) dye and agar media
<ol>
	<li>Prepare CAS dye (100 mL) with the following composition:
	<ol>
		<li>Dissolve 60 mg of CAS in 50 mL of distilled water (Solution 1).</li>
		<li>Dissolve 2.7 mg of FeCl3&#183;6H2O in 10 mL of 10 mM HCl (Solution 2).</li>
		<li>Dissolve 73 mg of Cetrimonium bromide (HDTMA) in 40 mL of distilled water (Solution 3).</li>
		<li>Carefully mix Solution 1, Solution 2, and Solution 3. Store it in a glass bottle.</li>
	</ol>
	</li>
	<li>Prepare CAS agar following the steps below:
	<ol>
		<li>Add 100 mL of MM9 salt solution to 750 mL of distilled water.</li>
		<li>Dissolve 32.24 g of piperazine-N,N&#39;-bis(2-ethanesulfonic acid) (PIPES) free acid.</li>
		<li>Add 15 g of Agar agar. Autoclave and allow it to cool.</li>
		<li>Add 30 mL of sterile Casamino acid solution and 10 mL of sterile 20% glucose solution to the mixture.</li>
		<li>Add 100 mL of CAS dye, mix, and pour it in aseptic conditions. 
		NOTE: Preparation of MM9 media, Casamino acid solution, and 8-Hydroxyquinoline are provided in Supplementary File 1. PIPES buffer is pH-sensitive. It will not dissolve until pH 5.6 is achieved. Ensure that the pH is constantly monitored because when PIPES starts to dissolve in water, it will further lower the pH. Extract Casamino acid with the same volume of 3% 8-hydroxyquinoline dissolved in chloroform. Leave the immiscible solution at 4 &#176;C for around 20 min and carefully collect the upper phase of the solution without disturbing the lower phase.</li>
	</ol>
	</li>
</ol>
2. Qualitative analysis of siderophores production
<ol>
	<li>Set the OD600 nm to 0.2 for 24 h grown cultures of P. aeruginosa.</li>
	<li>Using a sterile wire loop, streak the bacterial culture on a CAS agar plate.</li>
	<li>Incubate at 30 &#176;C for 24 h. 
	NOTE: Peptone water media or 0.8% normal saline can be used to dilute the bacterial culture. If no bacterial growth is observed at 24 h, incubate CAS plates for 48 to 72 h.</li>
</ol>
3. Quantitative estimation of total siderophores
<ol>
	<li>Re-inoculate 24-h-grown cultures of P. aeruginosa in Peptone water media after adjusting OD600 nm to 0.25, and incubate at 30 &#176;C for 48 h.</li>
	<li>After 48 h, centrifuge the bacterial culture at 4650 x g for 10 min at room temperature.</li>
	<li>After centrifugation, add 100 &#181;L of cell-free supernatant to a 96-well microtiter plate and add 100 &#181;L of CAS dye to it.</li>
	<li>Cover the plate with aluminum foil and incubate at room temperature for 20 min.</li>
	<li>After incubation, take spectrophotometric readings at 630 nm.</li>
	<li>Calculate the results obtained for the quantification of total siderophores as Percent Siderophore Unit (PSU). 
	NOTE: PSU can be calculated as: [(Ar&#160;- As)/Ar] x 100 
	where, Ar = absorbance of the reference at 630 nm, As = absorbance of the cell-free supernatant of the sample. For the reference, CAS dye should be added to uninoculated peptone water media. Fill all glassware, such as test tubes, flasks, etc., with 6 M HCl for 2 h and rinse them twice with distilled water to remove any trace of iron on them.</li>
</ol>
4. Quantitative estimation of pyoverdine
<ol>
	<li>Re-inoculate 24-h-grown cultures of P. aeruginosa in Peptone water media after adjusting OD600 nm to 0.25 and incubate at 30 &#176;C for 48 h.</li>
	<li>After 48 h, measure the OD600 nm of the bacterial growth before proceeding further.</li>
	<li>Centrifuge the bacterial culture at 4650 x g for 10 min at room temperature.</li>
	<li>After centrifugation, add 100 &#181;L of cell-free supernatant to a 96-well microtiter plate and add 100 &#181;L of 50 mM Tris-HCl (pH 8.0) to it.</li>
	<li>Take spectrophotometric readings at OD405 nm.</li>
</ol>
5. Pyochelin extraction and spectrophotometry
<ol>
	<li>Re-inoculate 24-h-grown cultures of P. aeruginosa in King&#39;s B media (Supplementary File 1) after adjusting OD600 nm to 0.25 and incubate at 30 &#176;C for 24 h.</li>
	<li>After 24 h, take 100 mL of culture and centrifuge at 4650 x g for 10 min at room temperature.</li>
	<li>After centrifugation, add 5 mL of 1 M citric acid to the supernatant. Extract twice with 50 mL of Ethyl acetate.</li>
	<li>Filter the organic phase with magnesium sulfate through a syringe filter. Store the filtered organic phase at -20 &#176;C.</li>
	<li>Take spectrophotometric readings at 320 nm. 
	NOTE: As pyochelin is a highly unstable compound at room temperature, perform the extraction process on ice. Use a 50 mL sterile syringe for filter separation. Place cotton at the tip of the syringe and add 1 gm of magnesium sulfate on it. Fix a sterile syringe filter at the tip of the syringe and collect the filtrate in a sterile tube.</li>
</ol>

Assessment of Siderophore Production from Pseudomonas aeruginosa Isolates

<ol><li>Wang, J., Pontopolous, K. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Regulation+of+iron+cellulatar+metabolism%5BTitle%5D)+AND+%22Biochemical+Journal%22%5BJournal%5D)">Regulation of iron cellulatar metabolism.</a> Biochemical Journal. 434 (3), 365-381 (2011).</li>
<li>Schalk, I., Perraud, Q. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Pseudomonas+aeruginosa+and+its+multiple+strategies+to+access+iron%5BTitle%5D)+AND+%22Environmental+Microbiology%22%5BJournal%5D)">Pseudomonas aeruginosa and its multiple strategies to access iron.</a> Environmental Microbiology. 25 (4), 811-831 (2022).</li>
<li>Ghssein, G., Ezzeddine, Z. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((A+review+of+Pseudomonas+aeruginosa+metallophores%3A+Pyoverdine%2C+pyochelin+and+pseudopaline%5BTitle%5D)+AND+%22Biology%22%5BJournal%5D)">A review of Pseudomonas aeruginosa metallophores: Pyoverdine, pyochelin and pseudopaline.</a> Biology. 11 (12), 1711(2022).</li>
<li>Sanchez-Jimenez, A., Marcos-Torres, F. J., Llamas, M. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Mechanisms+of+iron+homeostasis+in+pseudomonas+aeruginosa+and+emerging+therapeutics+directed+to+disrupt+this+vital+process%5BTitle%5D)+AND+%22Microbial+Biotechnology%22%5BJournal%5D)">Mechanisms of iron homeostasis in pseudomonas aeruginosa and emerging therapeutics directed to disrupt this vital process.</a> Microbial Biotechnology. 16 (7), 1475-1491 (2023).</li>
<li>Dingemans, P., Cornelis, J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Pseudomonas+aeruginosa+adapts+its+iron+uptake+strategies+in+function+of+the+type+of+infections%5BTitle%5D)+AND+%22Frontiers+in+Cellular+and+Infection+Microbiology%22%5BJournal%5D)">Pseudomonas aeruginosa adapts its iron uptake strategies in function of the type of infections.</a> Frontiers in Cellular and Infection Microbiology. 4 (11), (2013).</li>
<li>Lin, J., Cheng, J., Shen, X. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((The+pseudomonas+quinolone+signal+%28pqs%29%3A+Not+just+for+quorum+sensing+anymore%5BTitle%5D)+AND+%22Frontiers+in+Cellular+and+Infection+Microbiology%22%5BJournal%5D)">The pseudomonas quinolone signal (pqs): Not just for quorum sensing anymore.</a> Frontiers in Cellular and Infection Microbiology. 8 (7), 1-9 (2018).</li>
<li>Sass, G., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Intermicrobial+interaction%3A+Aspergillus+fumigatus+siderophores+protect+against+competition+by+pseudomonas+aeruginosa%5BTitle%5D)+AND+%22PLoS+ONE%22%5BJournal%5D)">Intermicrobial interaction: Aspergillus fumigatus siderophores protect against competition by pseudomonas aeruginosa.</a> PLoS ONE. 14 (5), 1-19 (2019).</li>
<li>Dao, K. -H. T., Hamer, K. E., Clark, C. L., Harshman, L. G. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Pyoverdine+production+by+pseudomonas+aeruginosa+exposed+to+metals+or+an+oxidative+stress+agent%5BTitle%5D)+AND+%22Ecological+Applications%22%5BJournal%5D)">Pyoverdine production by pseudomonas aeruginosa exposed to metals or an oxidative stress agent.</a> Ecological Applications. 9 (2), 441-448 (1999).</li>
<li>Visca, P., Imperi, F., Lamont, I. L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Pyoverdine+siderophores%3A+From+biogenesis+to+biosignificance%5BTitle%5D)+AND+%22Trends+in+Microbiology%22%5BJournal%5D)">Pyoverdine siderophores: From biogenesis to biosignificance.</a> Trends in Microbiology. 15 (1), 22-30 (2007).</li>
<li>Ackerley, D. F., Caradoc-Davies, T. T., Lamont, I. L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Substrate+specificity+of+the+nonribosomal+peptide+synthetase+pvdd+from+pseudomonas+aeruginosa%5BTitle%5D)+AND+%22Journal+of+Bacteriology%22%5BJournal%5D)">Substrate specificity of the nonribosomal peptide synthetase pvdd from pseudomonas aeruginosa.</a> Journal of Bacteriology. 185 (9), 2848-2855 (2003).</li>
<li>Geum-Jae-Jeong,, et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Pseudomonas+aeruginosa+virulence+attenuation+by+inhibiting+siderophore+functions%5BTitle%5D)+AND+%22Applied+Microbiology+and+Biotechnology%22%5BJournal%5D)">Pseudomonas aeruginosa virulence attenuation by inhibiting siderophore functions.</a> Applied Microbiology and Biotechnology. 107 (4), 1019-1038 (2023).</li>
<li>Dumas, Z., Ross-Gillespie, A., Kummerli, R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Switching+between+apparently+redundant+iron-uptake+mechanisms+benefits+bacteria+in+changeable+environments%5BTitle%5D)+AND+%22Biological+Sciences%22%5BJournal%5D)">Switching between apparently redundant iron-uptake mechanisms benefits bacteria in changeable environments.</a> Biological Sciences. 280 (1764), 20131055(2013).</li>
<li>Gaille, C., Reimmann, C., Haas, D. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Isochorismate+synthase+%28pcha%29%2C+the+first+and+rate-limiting+enzyme+in+salicylate+biosynthesis+of+pseudomonas+aeruginosa%5BTitle%5D)+AND+%22Journal+of+Biological+Chemistry%22%5BJournal%5D)">Isochorismate synthase (pcha), the first and rate-limiting enzyme in salicylate biosynthesis of pseudomonas aeruginosa.</a> Journal of Biological Chemistry. 278 (19), 16893-16898 (2003).</li>
<li>Schwyn, B., Neilands, J. B. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Universal+chemical+assay+for+the+detection+and+determination+of+siderophores%5BTitle%5D)+AND+%22Analytical+Biochemistry%22%5BJournal%5D)">Universal chemical assay for the detection and determination of siderophores.</a> Analytical Biochemistry. 160 (1), 47-56 (1987).</li>
<li>Louden, B. C., Haarmann, D., Lynne, A. M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Use+of+blue+agar+cas+assay+for+siderophore+detection%5BTitle%5D)+AND+%22Journal+of+Microbiology+%26+Biology+Education%22%5BJournal%5D)">Use of blue agar cas assay for siderophore detection.</a> Journal of Microbiology & Biology Education. 12 (1), 51-53 (2011).</li>
<li>Arora, N. K., Verma, M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Modified+microplate+method+for+rapid+and+efficient+estimation+of+siderophore+produced+by+bacteria%5BTitle%5D)+AND+%223+Biotech%22%5BJournal%5D)">Modified microplate method for rapid and efficient estimation of siderophore produced by bacteria.</a> 3 Biotech. 7 (381), 1-9 (2017).</li>
<li>Frac, M., Gryta, A., Oszust, K., Kotowicz, N. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Fast+and+accurate+microplate+method+%28biolog+mt2%29+for+detection+of+fusarium+fungicides+resistance%2Fsensitivity%5BTitle%5D)+AND+%22Frontiers+in+Microbiology%22%5BJournal%5D)">Fast and accurate microplate method (biolog mt2) for detection of fusarium fungicides resistance/sensitivity.</a> Frontiers in Microbiology. 7 (4), 1-16 (2016).</li>
<li>Cezard, C., Farvacques, N., Sonnet, P. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Chemistry+and+biology+of+pyoverdines%2C+pseudomonas+primary+siderophores%5BTitle%5D)+AND+%22Current+Medicinal+Chemistry%22%5BJournal%5D)">Chemistry and biology of pyoverdines, pseudomonas primary siderophores.</a> Current Medicinal Chemistry. 22 (2), 165-186 (2015).</li>
<li>Braud, A., Hoegy, F., Jezequel, K., Lebeau, T., Schalk, I. J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((New+insights+into+the+metal+specificity+of+the+pseudomonas+aeruginosa+pyoverdine-iron+uptake+pathway%5BTitle%5D)+AND+%22Environmental+Microbiology%22%5BJournal%5D)">New insights into the metal specificity of the pseudomonas aeruginosa pyoverdine-iron uptake pathway.</a> Environmental Microbiology. 11 (5), 1079-1091 (2009).</li>
<li>Brandel, J., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((a+siderophore+of+pseudomonas+aeruginosa%3A+Physicochemical+characterization+of+the+iron%28iii%29%2C+copper+%28ii%29+and+zinc+%28ii%29+complexes%5BTitle%5D)+AND+%22Dalton+Transactions%22%5BJournal%5D)">a siderophore of pseudomonas aeruginosa: Physicochemical characterization of the iron(iii), copper (ii) and zinc (ii) complexes.</a> Dalton Transactions. 41 (9), 2820-2834 (2012).</li>
<li>Hoegy, F., Mislin, G. L. A., Schalk, I. J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Pseudomonas+methods+and+protocols%5BTitle%5D)+AND+%22Methods+in+Molecular+Biology%22%5BJournal%5D)">Pseudomonas methods and protocols.</a> Methods in Molecular Biology. 1149, (2014).</li>
<li>Cunrath, O., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((The+pathogen+pseudomonas+aeruginosa+optimizes+the+production+of+the+siderophore+pyochelin+upon+environmental+challenges%5BTitle%5D)+AND+%22Metallomics%22%5BJournal%5D)">The pathogen pseudomonas aeruginosa optimizes the production of the siderophore pyochelin upon environmental challenges.</a> Metallomics. 12 (12), 2108-2120 (2020).</li>
<li>Ji, A. J., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((A+novel+and+sensitive+LC%2FMS%2FMS+method+for+quantification+of+pyochelin+in+human+sputum+samples+from+cystic+fibrosis+patients%5BTitle%5D)+AND+%22Biomarkers+%26+Applications%22%5BJournal%5D)">A novel and sensitive LC/MS/MS method for quantification of pyochelin in human sputum samples from cystic fibrosis patients.</a> Biomarkers & Applications. 4 (1), 135(2019).</li>
<li>Visaggio, D., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((A+highly+sensitive+luminescent+biosensor+for+the+microvolumetric+detection+of+the+pseudomonas+aeruginosa+siderophore+pyochelin%5BTitle%5D)+AND+%22ACS+Sensors%22%5BJournal%5D)">A highly sensitive luminescent biosensor for the microvolumetric detection of the pseudomonas aeruginosa siderophore pyochelin.</a> ACS Sensors. 6 (9), 3273-3283 (2021).</li>
<li>Miethke, M., Marahiel, M. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Siderophore-bases+iron+acquisition+and+pathogen+control%5BTitle%5D)+AND+%22Microbiology+and+Molecular+Biology+Reviews%22%5BJournal%5D)">Siderophore-bases iron acquisition and pathogen control.</a> Microbiology and Molecular Biology Reviews. 71 (3), 443-451 (2007).</li>
<li>Il, J. M. R., Lin, Y. -M., Lu, Y., Miller, M. J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((Studies+and+syntheses+of+siderophores%2C+microbial+iron+chelators%2C+and+analogs+as+potential+drug+delivery+agents%5BTitle%5D)+AND+%22Current+Medicinal+Chemistry%22%5BJournal%5D)">Studies and syntheses of siderophores, microbial iron chelators, and analogs as potential drug delivery agents.</a> Current Medicinal Chemistry. 7 (2), 159-197 (2000).</li>
</ol>

The authors have nothing to disclose.

This protocol enables researchers to quantitate total siderophores and two different siderophores of P. aeruginosa, namely pyoverdine and pyochelin, from the bacterial cell-free supernatant. In the CAS agar plates assay, CAS dye and Fe3+ ions form a complex. When bacteria produce siderophores, they quench Fe3+ ions from the CAS-Fe3+ complex, leading to a color change around the bacterial growth. This change results in a clear orange halo around the bacterial growth<sup class="xre...

Organisms require iron to perform various vital functions, such as electron transport and DNA replication1. Pseudomonas aeruginosa, a Gram-negative opportunistic pathogen, is known to possess a variety of virulence factors to establish infection in the host, among which one mechanism is siderophore formation2. During iron-depleting conditions, P. aeruginosa releases specialized molecules called siderophores, which quench iron from the surrounding environment. Siderophores chelate iron extracellularly, and the resulting ferric-siderophore complex is actively transported back to the cell3.
P. aeruginosa is known to produce two siderophores, pyoverdine and pyochelin. Pyoverdine is known to have a higher iron chelating affinity (1:1), whereas pyochelin is known to have a lesser iron chelating affinity (2:1)4. Pyochelin is also called a secondary siderophore because it has a lower iron chelating affinity5. The production and regulation of siderophores are actively controlled by Quorum Sensing (QS) systems in P. aeruginosa6.
Besides iron quenching, siderophores are also involved in regulating virulence factors and play an active role in biofilm formation7. Siderophores serve additional crucial roles, including involvement in cell signaling, defense against oxidative stress, and facilitation of interactions between microbial communities8. Siderophores are typically categorized based on the specific functional groups through which they chelate iron. The three primary bidentate ligands in this classification are catecholate, hydroxamate, and &#945;-hydroxycarboxylate3. Pyoverdines are hallmarks of fluorescent Pseudomonas species such as P. aeruginosa and P. fluorescens5. They consist of a mixed green fluorescent chromophore coupled to an oligopeptide containing 6-12 amino acids. Several non-ribosomal peptide synthetases (NRPs) are involved in their synthesis9. Four genes involved in pyoverdine production and regulation are pvdL, pvdI, pvdJ, and pvdD10. Pyoverdine is also responsible for infection and virulence in mammals11. P. aeruginosa is noted to produce pyochelin in moderate iron-limiting conditions, while pyoverdine is produced during severe iron-limiting environments12. Two operons involved in pyochelin production are pchDCBA and pchEFGHI13. It is noted that in the presence of pyocyanin, pyochelin (catecholate) induces oxidative damage and inflammation and generates hydroxyl radicals, which are harmful to host tissues11.
The Chrome Azurol Sulfonate (CAS) assay is widely adopted due to its comprehensiveness, high sensitivity, and greater convenience compared to microbiological assays, which, although sensitive, can be overly specific14. The CAS assay can be conducted on agar surfaces or in a solution. It relies on the color change that occurs when the ferric ion transitions from its intense blue complex to orange. The CAS colorimetric assay quantifies the depletion of iron from a Fe-CAS-surfactant ternary complex. This particular complex, consisting of metal, organic dye, and surfactant, has a blue color and exhibits an absorption peak at 630 nm.
This report presents a method for the qualitative detection of siderophore production, where one can detect the production of siderophores on an agar plate. A method for the quantitative estimation of total siderophore production in a microtiter plate and the detection and quantitative analysis of two siderophores, pyoverdine and pyochelin, from P. aeruginosa, is also provided.

<table><tbody><tr><td>Agar Agar, Type I</td><td>HIMEDIA</td><td>GRM666</td><td></td></tr><tr><td>8-Hydroxyquinoline</td><td>Loba Chemie</td><td>4151</td><td></td></tr><tr><td>Casamino Acid</td><td>SRL Chemicals</td><td>68806</td><td></td></tr><tr><td>Cetyltrimethyl Ammonium Bromide (CTAB)</td><td>HIMEDIA</td><td>RM4867-100G</td><td></td></tr><tr><td>Chloroform</td><td>Merck</td><td>1070242521</td><td></td></tr><tr><td>Chrome azurol sulfonate</td><td>HIMEDIA</td><td>RM336-10G</td><td></td></tr><tr><td>Citric acid</td><td>Merck</td><td>100241</td><td></td></tr><tr><td>Dextrose monohydrate</td><td>Merck</td><td>108342</td><td></td></tr><tr><td>Dichloromethane</td><td>Merck</td><td>107020</td><td></td></tr><tr><td>Ferric chloride hexahydrate</td><td>HIMEDIA</td><td>GRM6353</td><td></td></tr><tr><td>Glass Flasks</td><td>Borosil</td><td>5100021</td><td></td></tr><tr><td>Glass Test-tubes</td><td>Borosil</td><td>9820U05</td><td></td></tr><tr><td>Hydrochloric acid</td><td>SDFCL</td><td>20125</td><td></td></tr><tr><td>King&#039;s medium B base</td><td>HIMEDIA</td><td>M1544-500G</td><td></td></tr><tr><td>M9 Minimal Medium Salts</td><td>HIMEDIA</td><td>G013-500G</td><td></td></tr><tr><td>Magnesium Sulphate&amp;nbsp;</td><td>Qualigens</td><td>10034</td><td></td></tr><tr><td>MultiskanGO UV Spectrophotometer</td><td>Thermo Scientific</td><td>51119200</td><td></td></tr><tr><td>Peptone Type I, Bacteriological</td><td>HIMEDIA</td><td>RM667-500G</td><td></td></tr><tr><td>PIPES free acid</td><td>MP Biomedicals</td><td>190257</td><td></td></tr><tr><td>Potassium dihydrogen phosphate</td><td>Merck</td><td>1048731000</td><td></td></tr><tr><td>Proteose peptone</td><td>HIMEDIA</td><td>RM005-500G</td><td></td></tr><tr><td>Shimadzu UV-Vis Spectrophotometer</td><td>Shimadzu</td><td>2072310058</td><td></td></tr><tr><td>Sigma Laborzentrifuge</td><td>Sigma-Aldrich</td><td>3-18K</td><td></td></tr><tr><td>Sodium chloride</td><td>Qualigens</td><td>15915</td><td></td></tr></tbody></table>

qualitative and quantitative analysis of siderophore production from pseudomonas aeruginosa

Qualitative and Quantitative Analysis of Siderophore Production from Pseudomonas aeruginosa

Pseudomonas aeruginosa (P. aeruginosa) is known for its production of a diverse range of virulence factors to establish infections in the host. One such mechanism is the scavenging of iron through siderophore production. P. aeruginosa produces two different siderophores: pyochelin, which has lower iron-chelating affinity, and pyoverdine, which has higher iron-chelating affinity. This report demonstrates that pyoverdine can be directly quantified from bacterial supernatants, while pyochelin needs to be extracted from supernatants before quantification.
The primary method for qualitatively analyzing siderophore production is the Chrome Azurol Sulfonate (CAS) agar plate assay. In this assay, the release of CAS dye from the Fe3+-Dye complex leads to a color change from blue to orange, indicating siderophore production. For the quantification of total siderophores, bacterial supernatants were mixed in equal proportions with CAS dye in a microtiter plate, followed by spectrophotometric analysis at 630 nm. Pyoverdine was directly quantified from the bacterial supernatant by mixing it in equal proportions with 50 mM Tris-HCl, followed by spectrophotometric analysis. A peak at 380 nm confirmed the presence of pyoverdine. As for Pyochelin, direct quantification from the bacterial supernatant was not possible, so it had to be extracted first. Subsequent spectrophotometric analysis revealed the presence of pyochelin, with a peak at 313 nm.

Before quantification of siderophores from clinical isolates, a qualitative screening for siderophore production was carried out to ensure siderophores production. Qualitative detection of siderophores from clinical isolates was observed by streaking bacteria on CAS agar plates. Three clinical isolates, namely MR1, TL7, J3, along with PAO1 (the reference strain), were selected for the study. All three clinical isolates and PAO1 showed positive results for siderophore production, where a c...

This protocol provides both qualitative and quantitative analyses of total siderophores, pyoverdine, and pyochelin from Pseudomonas aeruginosa.

Pseudomonas aeruginosa (P. aeruginosa) is known for its production of a diverse range of virulence factors to establish infections in the host. One such ...

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We present a protocol for rapid screening of environmental samples for siderophore potential contributing to micronutrient bioavailability and turnover in terrestrial systems.

High-throughput Siderophore Screening from Environmental Samples: Plant Tissues, Bulk Soils, and Rhizosphere Soils

Here, we describe a growth condition to culture the small colony variant of Pseudomonas aeruginosa. We also describe two separate methods for the detection and quantitation of the exopolysaccharide alginate produced by P. aeruginosa using a traditional uronic acid carbazole assay and an alginate-specific monoclonal antibody (mAb) based ELISA.

Culture of Small Colony Variant of Pseudomonas aeruginosa and Quantitation of its Alginate

We describe here a protocol to characterize protein-protein interactions between two highly-differently expressed proteins in live Pseudomonas aeruginosa using FLIM-FRET measurements. The protocol includes bacteria strain constructions, bacteria immobilization, imaging and post-imaging data analysis routines.

FLIM-FRET Measurements of Protein-Protein Interactions in Live Bacteria.

Pseudomonas aeruginosa produces the rhamnolipid biosurfactants. Thin-layer chromatography detects and determines the proportion of mono- and di-rhamnolipids produced by each strain. Quantification of total rhamnolipids involves assessing rhamnose equivalents present in these biosurfactants extracted from the culture supernatants using the orcinol method.

Detection and Quantification of Mono-Rhamnolipids and Di-Rhamnolipids Produced by Pseudomonas aeruginosa

Bacteria colonize host tissues that vary in oxygen and iron bioavailability, yet most approaches to studying bacteria use aerated, rich media. This protocol describes culturing the human pathogen Yersinia pseudotuberculosis under varying iron concentrations and oxygen tension, and quantifying activity of the Yersinia type III secretion system, which is an important virulence factor.

Quantifying Yersinia pseudotuberculosis Type III Secretion System Activity Following Iron Starvation and Anaerobic Growth

In this manuscript, we provide a comprehensive protocol for assessing antibiotic survival for Pseudomonas aeruginosa and Staphylococcus aureus, transforming plasmids into P. aeruginosa and S. aureus to create reporter strains and visualize phenotypic variants, such as persisters, by time-lapse epifluorescence microscopy.

Time-Lapse Epifluorescence Microscopy Imaging of Pseudomonas aeruginosa and Staphylococcus aureus Heterogeneous Phenotypes

The rotorod test is used to assess motor status in the walking movement of hemi-Parkinson analogue rats.

Use of Rotorod as a Method for the Qualitative Analysis of Walking in Rat

The fission yeast, Schizosaccharomyces pombe, is a good model system to study basic cellular processes. Here we describe a method to perform quantitative live cell analysis of fission yeast. In this particular experiment we focus on organisation of the genome within the cell nucleus, but the method can also be used to study cytosolic factors.

Quantitative Live Cell Fluorescence-microscopy Analysis of Fission Yeast

Learn a simplified spectrophotometric protocol to quantify siderophores, pyoverdine, and pyochelin in Pseudomonas aeruginosa. This method enables reliable virulence factor analysis for bacterial iron acquisition research.

Qualitative and Quantitative Analysis of Siderophore Production from Pseudomonas aeruginosa

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