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JoVE Journal
Cancer Research
Glycomics-Guided Glycoproteomics Facilitates Comprehensive Profiling of the Glycoproteome in Comp...
Glycomics-Guided Glycoproteomics Facilitates Comprehensive Profiling of the Glycoproteome in Comp...
JoVE Journal
Cancer Research
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JoVE Journal Cancer Research
Glycomics-Guided Glycoproteomics Facilitates Comprehensive Profiling of the Glycoproteome in Complex Tumor Microenvironments

Glycomics-Guided Glycoproteomics Facilitates Comprehensive Profiling of the Glycoproteome in Complex Tumor Microenvironments

Full Text
1,881 Views
10:59 min
February 7, 2025

DOI: 10.3791/67405-v

The Huong Chau1, Naaz Bansal1, Anastasia Chernykh1, Rebeca Kawahara1,2, Morten Thaysen-Andersen1,2

1School of Natural Sciences, Faculty of Science and Engineering,Macquarie University, 2Institute for Glyco-core Research (iGCORE),Nagoya University

This protocol details the glycomics-guided glycoproteomics method, an integrated omics technology that offers comprehensive insights into the heterogeneous glycoproteome in complex tumor microenvironments required to better understand the glycobiology of cancers.

So we study complex carbohydrates, or glycans, in the innate immune system and immune-related disorders, focusing currently on sepsis and cancer. Our work involves analytical methods and systems glycobiology, including glycomics and glycoproteomics methods, for the detailed characterization of the human glycoprotein. Glycoproteomics has experienced tremendous advances over the past decades, and progress is no longer limited by the shortage of high quality mass spectrometry data available.

Rather, the challenge is to interpret and generate biological knowledge from the spectral data. The glycomics-guided glycoproteomics method enables glyco scientists to obtain deep and accurate insight into the glycoproteome and hard barriers with human health indices, Glycoproteomics is uniquely capable of generating site-specific insights into the glycoproteome. But glycopeptide rates remain high.

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