Animal experiments were conducted in accordance with the principles of the ARRIVE Guidelines. All experimental procedures were reviewed and approved by the Institutional Animal Care and Use Committee (IACUC) of Ningxia Medical University (Approval No. IACUC-NYLAC-2022-151). Cell experiments using human embryonic lung fibroblasts (HFL-1) that are commercially available, thus ethical approval was waived.
Experimental preparation
Experimental animals
Sprague Dawley (SD) (n = 60, SPF grade, 6-8 weeks, 180-200 g, 50% male and 50% female) were purchased at the Animal Experimentation Center (Ningxia Medical University, License No. SCXK (Ningxia)2020-0001) and housed in the Animal Barrier Center of Ningxia Medical University at 23-26 °C, 40-60% humidity, and 12 h light and darkness cycles. The rats were allowed free access to food and water.
Cell culture
Human embryonic lung fibroblasts (HFL-1) were grown in Ham's F-12K culture medium supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin (P/S) at 37 °C, 5% CO2, and 95% air. For experiments, cells in the logarithmic phase were used.
Preparation of QJD
QJD is composed of Sang Ye (9 g), Shi Gao (8 g), Gan Cao (3 g), Ren Shen (2 g), Hu Ma Ren (3 g), E Jiao (3 g), Mai Dong (4 g), Xing Ren (2 g), Pi Pa Ye (3 g). All components were authenticated by Professor Gao Xiaojuan, School of Medicine, Ningxia Medical University.
The herbs were soaked in 10 times their volume of water for 1 h, then boiled for 30 min to obtain the first extract. Then an additional 8 times volume of water was added to the residue and boiled for another 30 min to obtain the second extract. The two extracts were mixed and filtered through gauze, and concentrated to 1.12 g/mL.
Experimental procedures
In vivo experiments
Animal grouping and drug administration
After having a normal diet for 1 week of adaptive feeding, 60 rats were randomly assigned to 6 groups of 10 animals (control, model group, pifenidone group (PFD, 162 mg/kg), QJD-L, QJD-M, and QJD-H.
Except for the control group, all animals were anaesthetized by intraperitoneal injection of 2% pentobarbital sodium solution (40 mg/kg), fixed on a rat plate with the head upwards, and laryngoscopic intubation was performed. The rats received BLM (5 mg/kg), while control animals received an equal volume of saline. Then, the rats were held upright and rotated along the longitudinal axis for 3 min in order to diffuse the drug in the lungs15. After successful modeling, administration of the drug started on the following day. Considering the clinical QJD and PFD doses (37 g/day and 1800 mg/day, respectively) and based on the equivalent dose of the drug in humans and rats according to the body surface area, the PFD group received 162 mg/kg PFD while the QJD-L, QJD-M, and QJD-H groups received 1.65 g/kg, 3.3 g/kg, and 6.6 g/kg QJD, respectively. Control and model groups received saline for 4 weeks13.
Anesthesia and sampling of animals
After the last administration, the rats had only access to water for 12 h. At the time of sampling, rats were anaesthetized with 2% pentobarbital sodium solution (40 mg/kg) through intraperitoneal injection. Lungs were excised, washed with pre-cooled physiological saline to remove blood stains and residual connective tissues, weighed, and the lung coefficient was calculated (lung coefficient = lung wet weight (mg)/body mass (g) × 100%). The upper lobe was fixed in 4% paraformaldehyde for hematoxylin and eosin (HE), Masson staining, and immunofluorescence. The lower lobe of the left lung was cut and fixed in 2.5% glutaraldehyde for transmission electron microscopy observation. The right lung was stored at -80 °C for future analysis.
General condition of the animal
During the experimental period, the rats were observed daily for mental status, respiration condition, behavior, and coat luster. In case of death, the date and time of death were recorded.
Histopathological observations of the lungs
The collected lung tissues were fixed in 4% paraformaldehyde for 24 h, dehydrated, embedded, and sectioned. HE and Masson staining were performed according to the kit instructions. The degree of alveolar inflammation was evaluated with the Szapiel scale, and the severity of fibrosis was assessed with the Ashcroft scale16.
Ultrastructural observation of lung tissue
The collected lung tissues were fixed in 2.5% glutaraldehyde for more than 4 h, washed with PBS, and fixed with 1% osmium tetroxide for 1.5 h. Then, they were dehydrated with ethanol and acetone gradients, followed by impregnation, embedding, trimming, sectioning, and staining. Finally, they were observed under a transmission electron microscope to observe the ultrastructural changes.
Immunofluorescence of lung tissue
The paraffin sections were dewaxed and subjected to antigen retrieval. Then, they were blocked at room temperature for 1 h, and the sections were incubated with the corresponding primary antibodies (α-SMA, COL 1, FN1, TGF-β1, Smad2/3, and p-Smad2/3; dilution: 1:200) overnight at 4 °C. Then, the sections were washed with PBS and incubated with the secondary antibody (Goat Anti-Rabbit IgG (H+L) Cy3 conjugate; dilution: 1: 1000) for 1 h at room temperature. Finally, the sections were washed with PBS, and the nuclei were counterstained with 4',6-diamidino-2-phenylindole (DAPI) in the dark for 10 min at room temperature. Finally, the sections were observed under a fluorescence microscope, and images were captured.
Western blot (WB) analysis of lung tissue
Approximately 10 mg of frozen lung tissue was minced and lysed in 100 µL of strong radioimmunoprecipitation assay (RIPA) lysis buffer containing protease and phosphatase inhibitors. The tissue was thoroughly homogenized using a homogenizing rod and incubated on ice for 30 min. The lysates were then centrifuged at 10,625 g for 15 min at 4°C, then the supernatant was collected. Protein concentration in the supernatant was determined using the bicinchoninic acid (BCA) assay, and the samples were normalized accordingly. After electrophoresis, membrane transfer, and blocking, the membranes were incubated with primary antibodies (α-SMA, COL-1, FN1, TGF-β1, Smad2/3, and p-Smad2/3; dilution: 1:1000) at 4 °C overnight and then with secondary antibodies (Goat Anti-Rabbit IgG (H+L) HRP; dilution: 1: 10,000) at room temperature for 2 h. Subsequently, luminescent-mediated imaging was performed on a gel imaging system. Gray-scale scanning analysis was conducted using ImageJ software. All experiments were independently repeated three times.
In vitro tests
CCK- 8 analysis
HFL-1 cells grown in log phase were taken and inoculated in 96-well plates at 1×104 cells per well. The next day, the cells were treated with different concentrations of TGF-β1 (0, 2, 4, 6, 8, 10, 12, 14, 16, 18, 20 µg/L) for 12, 24, and 36 h. Then, 10 µL of CCK-8 solution was added, the plates were incubated at 37 °C for 2 h, and optical density (OD) was detected at 450 nm. The optimal TGF-β1 concentration and intervention time were selected for subsequent experiments.
Next, HFL-1 cells were inoculated in 96-well plates at 1 × 104 cells per well, QJD was added with or without TGF-β1, and incubated for 24 h at 37 °C. Then, 10 µL of CCK-8 solution was added and incubated at 37 °C for 2 h. The OD was detected at 450 nm, and cell viability was estimated as cell proliferation viability (%) = ([OD experimental group - OD blank]/[OD control - OD blank]) × 100.
Cell grouping
Cells were grouped as Control (conventional culture), Model (10 µg/L TGF-β1), QJD (model group with 50 mg/L QJD), SRI-011381 (model group with 10 mg/L SRI-011381), and QJD + SRI-011381 (model group with 10 mg/L SRI-011381 and 50 mg/L QJD). Cells in each group were treated as outlined above and cultured for 24 h.
WB analysis
Collected cells were lysed in 100 µL of strong RIPA lysis buffer containing protease and phosphatase inhibitors. The lysate was thoroughly mixed and incubated on ice for 30 min. Samples were then centrifuged at 10,625 g for 15 min at 4 °C, and the supernatant was collected. Protein concentration in the supernatant was determined using the BCA assay, and samples were normalized accordingly. After electrophoresis, membrane transfer, blocking, membranes were incubated with primary antibodies (α-SMA, COL-1, FN1, TGF-β1, Smad2/3, and p-Smad2/3; dilution: 1:1000) at 4 °C for overnight, and secondary antibodies (Goat Anti-Rabbit IgG (H+L) HRP; dilution: 1: 10,000) at room temperature for 2 h. Subsequently, a luminescent solution was added, and imaging was performed on a gel imaging system. Gray-scale scanning analysis was conducted using ImageJ software. All experiments were independently repeated three times.
RT-qPCR analysis
Total RNA was extracted from the collected cells using Trizol lysis buffer (1 mL per dish). The lysate was thoroughly mixed and incubated at room temperature for 5 min. Then 200 µL chloroform was added, vortexed vigorously for 15 s, and incubated for 3 min at room temperature. Samples were then centrifuged at 10,625 g for 15 min at 4 °C, and the aqueous phase was collected. An equal volume of isopropanol was added, mixed thoroughly, and incubated for 10 min at room temperature. The mixture was centrifuged at 10,625 g for 10 min at 4 °C, and the supernatant was discarded. A white RNA pellet was visible at the bottom of the tube. The pellet was washed with 1 mL of pre-chilled 75% ethanol by gently inverting the EP tube, then centrifuged at 4150 g for 5 min at 4 °C. The supernatant was discarded, and the pellet was air-dried for 5 min at room temperature. The RNA was then dissolved in 20-50 µL of RNase-free water and stored at -80 °C. Total RNA was purified using a commercial RNA extraction kit. The concentrations were normalized prior to reverse transcription, and RT-qPCR was performed. Primers used in this study are listed in Table 1.
Statistical analysis
Data were represented as mean ± standard deviation (x̅±s). Excel and GraphPad Prism 8 were used for analysis and figure generation. Student's t-test was used between two groups, and one-way ANOVA was used for comparison between multiple groups. A P<0.05 was considered statistically significant.