Research Article

Quantification of Changes in Bifidobacteria and Lactobacilli Colony-forming Units During Rifaximin Treatment and Synbiotic Gel in Healthy Volunteers

DOI:

10.3791/70201

May 29th, 2026

In This Article

Summary

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This clinical trial evaluated counts of bifidobacteria and lactobacilli after 1 week of rifaximin treatment and a Synbiotic Gel composed of Lactobacillus acidophilus NCFM and Bifidobacterium lactis Bi07, with agave inulin, during the rifaximin treatment and 4 weeks after, compared with a placebo gel, showing that the Synbiotic Gel may help maintain lactobacilli and bifidobacteria.

Abstract

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Although the gut microbiota is generally stable, it can be influenced by antibiotic treatment. Rifaximin, which is used to treat gastrointestinal disorders, is frequently administered with probiotics to reduce the risk of dysbiosis. Lactobacillus acidophilus interacts with intestinal cells and uses prebiotic compounds. Bifidobacteria, particularly Bifidobacterium infantis ssp. lactis Bi07, is a probiotic that has been associated with beneficial effects in the gut. In vitro studies have demonstrated the superiority of agave fructans over chicory inulin. No studies have documented changes in fecal lactobacilli and bifidobacteria counts following the concomitant administration of rifaximin and synbiotic. Our objective was to evaluate changes in the CFU counts of gut bifidobacteria and lactobacilli in healthy volunteers after consumption of Synbiotic Gel, which contains Lactobacillus acidophilus NCFM, Bifidobacterium lactis Bi07, and agave inulin as a prebiotic, during 1 week of rifaximin treatment and for 4 weeks after. In a randomized, placebo-controlled, double-blind clinical trial, healthy participants without antimicrobial treatment in the previous month were randomized 1:1 in two groups (10 participants per group). The Synbiotic Gel group received 10.32 g of agave inulin as a prebiotic and 4 × 109 CFU/g of Lactobacillus acidophilus NCFM and 4 × 109 CFU/g of Bifidobacterium lactis Bi07 per day, for 5 weeks, and 200 mg rifaximin twice a day for the first week. The Placebo Gel group received placebo gel for 5 weeks and 200 mg rifaximin twice a day for the first week. Bacterial changes were estimated by quantifying CFU by microbiological assessment of feces. Five weeks later, the lactobacilli and bifidobacteria populations did not change. The detection of Lactobacillus acidophilus NCFM and Bifidobacterium lactis Bi07 in some stool samples suggests transient and partial colonization, highlighting the need for dose-response studies with this synbiotic product.

Introduction

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The human gut microbiota is a densely populated community that includes permanently present native species and other transient microorganisms. Although its composition can vary between individuals, it is generally considered stable. However, it can be influenced by age, infection, and antibiotic treatment1,2,3. Rifaximin, a broad-spectrum antibiotic with low intestinal absorption, is used to treat intestinal disorders and can alter microbiota. Probiotic bacteria from the genera Lactobacillus and Bifidobacterium are used to mitigate these effects

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Protocol

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The protocol was approved by the Institutional Committee for Biomedical Research in Humans (CIIBH) of the Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubiran (INCMNSZ) (REFERENCE 1734). All participants provided informed consent before being included in this study.

Study design and population

This was a randomized, placebo-controlled, double-blind clinical trial with a 5-week follow-up period. Workers of the INCMNSZ were invited to participate in the study, and healthy volunteers aged 20–50 years without antimicrobial treatment in the previous month who accepted and ....

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Results

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Twenty healthy volunteers were randomly divided into the Synbiotic Gel group (n = 10) and Placebo Gel group (n = 10) (Figure 2 and Table 1). In the Synbiotic Gel group, seven were men, and three were women, with a median age of 31 years (range, 27–35 years); in the Placebo Gel group, three were men, and seven were women, with a median age of 33 years (range, 28–38 years). The groups were similar in terms of age, sex, weight, and BMI. Treatment adherence was .......

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Discussion

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In the present study, we found a significant reduction in enterobacterial counts in the fecal samples of subjects in the placebo group from the first week of intervention and in subjects in the Synbiotic Gel group in the first and second weeks. This change can be explained using rifaximin, which has been described as mitigating pathogenic bacterial overgrowth14. In our study, the Synbiotic Gel group following rifaximin showed a positive effect: the median population of Lactobacillus strain did not.......

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Disclosures

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The authors have no conflicts of interest to declare.

Acknowledgements

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We gratefully acknowledge Kurago-Biotek for kindly providing the synbiotic and placebo gel. The sponsor did not have any role in study design, collection, analysis, and interpretation of data, in the writing of the report and in the decision to submit the paper for publication.

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
BBL tubeNANAAny brand can be used 
DP mediumNANAAny brand can be used 
Frozen gel packs
MacConkey mediumNANA
MRS mediumNANAAny brand can be used 
PBG vialPhosphate buffer, gelatine, salts 0.05% cysteine as reducing agent for02
Petri dishes 
Placebo BlendKuragoBiotek-BabyCat.NASame physical and sensory properties as the sym iotic gel, but without the active ingredients
Styrofoam continer
Symbiotic blendKuragoBiotek-BabyCat.NANon-dairy product composed of Lactobacillus acidophilus NCMF and Bifidobacterium infantis Bi-07 (2 x 109 CFU/g), and 17.2 g of agave inulin as a prebiotic in a pack of 15 g

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Tags

Gut MicrobiotaRifaximin TreatmentSynbiotic GelBifidobacteria CFULactobacilli CFUProbiotic SupplementationAgave InulinPlacebo Controlled TrialFecal Microbiological AssessmentDose Response Studies

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