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Ethics statement
This study was an in vitro bacterial study and did not involve human participants, animal subjects, or patient-derived materials. Therefore, institutional review board approval and animal ethics approval were not required.
Evaluation of AO7 degradation in the vitamin C–assisted Fenton system
To assess the effect of vitamin C on the observable oxidative behavior of the Fenton reaction, Acid Orange 7 (AO7) degradation was used as an indirect chemical readout of oxidative activity. This assay does not specifically quantify individual reactive oxygen species. Prepared 100 mL of AO7 solution at 5 mg/L and adjusted the solution to pH 3. Added H₂O₂ and FeSO₄ to final concentrations of 2.2 mM and 0.055 mM, respectively. Added vitamin C either as a single bolus at reaction initiation or in a three-step dosing scheme. For the dose-response experiment, Vc: Fe2⁺ molar ratios of 0, 0.12, 0.24, 0.48, 2, 4, 6, and 8 were used, corresponding to final vitamin C concentrations of 0, 0.0066, 0.0132, 0.0264, 0.110, 0.220, 0.330, and 0.440 mM, respectively, when FeSO₄ is used at 0.055 mM. For the three-step addition condition, divided the same total vitamin C amount into three equal aliquots and added one aliquot at 3, 5, and 7 min after reaction initiation. For example, at a Vc:Fe2⁺ ratio of 0.48, added vitamin C at 0.0088 mM per aliquot, giving a final total concentration of 0.0264 mM.
Stirred the reaction solution continuously in the dark for 10 min while maintaining the temperature below 30 °C. Collected 2 mL samples before and after the reaction. Measured absorbance at 483 nm using a UV-Vis spectrophotometer, and calculated the AO7 degradation rate using Equation 1:
Degradation rate (%) = [(A₀ − A₁) / A₀] × 100% (1)
Here, A₀ represents the absorbance of the sample before the reaction, while A₁ represents the absorbance of the sample after the reaction.
Assessment of •OH-associated fluorescence signal using a TA probe
To assess hydroxyl radical-associated fluorescence signals under the same acidic in vitro conditions used in the antibacterial experiments, a cell-free chemical system was established using disodium terephthalate (TA, 1 mM) as a fluorescence probe. This assay was used as a relative indicator of •OH-associated product formation and was not interpreted as an absolute quantification of hydroxyl radical generation. Seven groups were included: (1) blank (1 mM TA in reaction buffer only), (2) H₂O₂ alone, (3) Fe2⁺ alone, (4) Vc alone (stepwise addition), (5) conventional Fenton (Fe2⁺ + H₂O₂), (6) vitamin C–assisted Fenton with bolus Vc addition (Fe2⁺ + H₂O₂ + Vc, bolus), and (7) Vc–assisted Fenton with stepwise Vc addition (Fe2⁺ + H₂O₂ + Vc, stepwise). In the stepwise-addition condition, Vc was introduced at 3, 5, and 7 min after reaction initiation in equal aliquots, whereas the bolus condition received the same total amount of Vc as a single addition.
Aliquots were collected over a 10-min reaction period, immediately alkalinized with NaOH to quench further radical reactions and stabilize fluorescence, and stored at 4 °C prior to measurement. Fluorescence intensity of the TA-derived product was measured using a microplate reader (Ex/Em: 315/425 nm). Radical generation was expressed as fluorescence intensity after blank subtraction and used as a relative indicator of radical generation. At least three independent experiments were performed, and data were presented as time-course profiles and endpoint comparisons at 10 min.
Evaluation of antibacterial performance by colony counting
H. pylori strains were stored at −80 °C in brain heart infusion (BHI) broth containing 25% glycerol. The primary strain used for the main colony-counting assay, rescue assay, matrix-interference assay, live/dead fluorescence staining, and scanning electron microscopy analysis was H. pylori G27. Before each experiment, bacteria were streaked onto Columbia blood agar plates and incubated for 3 days at 37 °C under microaerophilic conditions consisting of 5% O₂, 10% CO₂, and 85% N₂22.
Colony counting assay in the primary strain
Used colony-forming unit (CFU) enumeration to evaluate antibacterial activity under different treatment conditions. Included the following groups: untreated control, H₂O₂ alone, vitamin C alone, conventional Fenton reaction, and vitamin C–assisted Fenton reaction. If an Fe2⁺-alone group was not included in the original experiment, avoid interpreting the primary assay as fully separating iron-only effects from Fenton reaction-mediated oxidative effects. Harvested cultured H. pylori and resuspend the bacteria in physiological saline. Adjusted the optical density at 600 nm (OD₆₀₀) to 0.5, and transferred the suspension into physiological saline containing 3 mM urea adjusted to pH 3. Added H₂O₂, FeSO₄, and vitamin C according to the assigned treatment group. Used final concentrations of 2.2 mM H₂O₂ and 0.055 mM FeSO₄. For vitamin C–assisted Fenton treatment, added vitamin C in three equal aliquots at 3, 5, and 7 min, with a final total concentration of 0.0264 mM.
After 10 min of treatment, each sample was immediately diluted 100-fold in phosphate-buffered saline (PBS, pH 7.4) to neutralize the acidic suspension and reduce carryover of residual oxidants and iron into the plating step. Plated the diluted bacterial suspension onto Columbia blood agar plates and incubated at 37 °C for 3 days under microaerophilic conditions of 5% O₂, 10% CO₂, and 85% N₂. Counted CFUs and calculated antibacterial activity as log₁₀ CFU reduction relative to the untreated control using Equation 2:
log10 CFU reduction = log10(CFUcontrol) − log10(CFUtreated) (2)
Rescue assay
To examine whether the antibacterial activity of the vitamin C–assisted Fenton system was associated with iron availability and radical-related processes, rescue experiments were performed using deferoxamine (DFO) as an iron chelator and thiourea as a hydroxyl radical scavenger. DFO or thiourea was added to the bacterial suspension 5 min before the addition of FeSO₄ and H₂O₂. DFO and thiourea were used at final concentrations of 100 µM and 5 mM, respectively.
Six experimental groups were included: untreated control, vitamin C–assisted Fenton, vitamin C–assisted Fenton with DFO, vitamin C–assisted Fenton with thiourea, DFO alone, and thiourea alone. All other experimental parameters, including pH, saline/urea background, H₂O₂ concentration, FeSO₄ concentration, vitamin C dosing schedule, treatment duration, dilution/neutralization before plating, and incubation conditions, were identical to those used in the primary colony-counting assay. Antibacterial activity was quantified by CFU enumeration and expressed as log₁₀ CFU reduction relative to the untreated control.
Multistrain validation
To provide limited cross-strain support for the antibacterial effect observed in the primary strain, the colony-counting assay was further applied to two additional H. pylori reference strains, ATCC 43504 and ATCC 26695. For each strain, three experimental groups were included: untreated control, conventional Fenton reaction, and vitamin C–assisted Fenton reaction with stepwise vitamin C addition. Experimental conditions and procedures were identical to those used in the primary colony-counting assay. Antibacterial activity was expressed as log₁₀ CFU reduction relative to the untreated control for each strain. Each experiment was performed with n = 3 independent biological replicates, and data were presented as individual data points with mean ± standard deviation.
Matrix interference assay
To evaluate whether organic matrix components could attenuate the antibacterial activity of the vitamin C–assisted Fenton system, a protein interference model was established using bovine serum albumin (BSA). BSA was included at final concentrations of 0, 1, and 3 g·L⁻1. At each BSA concentration, three experimental groups were included: (1) untreated control, (2) conventional Fenton (Fe2⁺ + H₂O₂), and (3) vitamin C–assisted Fenton with stepwise vitamin C addition. The assay was conducted using the primary strain under the same protocol described in the primary colony counting assay, with identical pH conditions, saline/urea background, reagent concentrations, treatment duration (10 min), and plating procedures. Antibacterial activity was expressed as log₁₀ CFU reduction relative to the untreated control at each BSA concentration. Each experiment was performed at least three times independently. The primary comparison focused on whether the enhanced Fenton condition remained superior to, or at least not weaker than, the conventional Fenton condition under protein-containing conditions.
Bacterial live/dead fluorescence staining
After treatment, the bacterial suspension was diluted 100-fold in PBS as described above to reduce residual acidic and oxidative carryover. Centrifuged the suspension at 1,800 × g for 10 min at room temperature and discarded the supernatant. Resuspended the bacterial pellet in 200 µL of physiological saline. Added SYTO9 and propidium iodide (PI) to final concentrations of 6 µM and 30 µM, respectively. Incubated the suspension in the dark for 20 min at room temperature. Placed 5–10 µL of the stained bacterial suspension onto a clean glass slide and covered it with a coverslip. Acquired fluorescence images using a fluorescence microscope with green and red fluorescence channels under identical exposure settings for all treatment groups. Captured at least three randomly selected fields for each group. Used the images as qualitative visual evidence of live/dead staining patterns rather than as a quantitative measurement of bacterial viability.
Bacterial morphology analysis by scanning electron microscopy
After treatment, the bacterial samples were collected and fixed in 2.5% glutaraldehyde prepared in 0.1 M phosphate buffer (pH 7.4) at 4 °C for 12 h. After fixation, the samples were washed with phosphate buffer to remove residual fixative. The samples were then sequentially dehydrated in graded ethanol solutions of 50%, 70%, 90%, and 100%. After dehydration, critical point drying was performed. The dried samples were mounted onto SEM stubs and sputter-coated with a thin gold layer of approximately 10 nm. Bacterial morphology was examined using scanning electron microscopy at an accelerating voltage of 5 kV. Representative images were acquired at low and high magnification for each treatment group. SEM images were used as qualitative morphological observations rather than as quantitative evidence of a defined damage mechanism.
Statistical analysis
Statistical analyses were performed using GraphPad Prism version 10.0. All quantitative experiments were performed with n = 3 independent biological replicates, and data are presented as mean ± standard deviation (SD). For TA fluorescence assays, statistical comparisons among multiple treatment groups were performed using one-way analysis of variance (ANOVA) followed by Tukey’s multiple-comparisons test. For colony-counting assays in the primary strain involving multiple treatment conditions, statistical comparisons were performed using one-way ANOVA followed by Tukey’s multiple-comparisons test. For rescue assays, between-group comparisons were performed using one-way ANOVA followed by Dunnett’s multiple-comparisons test, with the vitamin C–assisted Fenton group set as the reference. For limited cross-strain validation experiments, log₁₀ CFU reductions were compared between the conventional Fenton and vitamin C–assisted Fenton groups within each strain using an unpaired two-tailed t-test. For matrix-interference assays, two-way ANOVA was performed with treatment and BSA concentration as factors, including the interaction term. Pairwise comparisons between treatments at each BSA concentration were conducted using Šídák’s multiple-comparisons test. Statistical significance was defined as P < 0.05. Significance levels are indicated as *p < 0.05, ** P < 0.01, ***P < 0.001, and ****p < 0.0001.