This study was approved by the TongzhouBay People's Hospital Medical Ethics Committee (Approval No. 2024122001). The procedures used in this study adhere to the tenets of the Declaration of Helsinki. Informed consent was obtained from all individual participants included in the study. Consent for publication was obtained for every individual person’s data included in the study.
Research subjects
This study retrospectively selected 102 patients with T2DM diagnosed at our hospital between January 2022 and June 2023. Eligible participants met the diagnostic criteria for T2DM, including fasting blood glucose ≥7.0 mmol/L and 2-h postprandial blood glucose ≥11.1 mmol/L, had not received treatment with insulin or new-generation antidiabetic drugs within the previous 3 months, had no severe complications involving the heart, liver, kidneys, or other organs and no history of malignant tumors, autoimmune diseases, or infectious diseases, and had complete clinical records. Patients with type 1 diabetes or other specific types of diabetes, those in a state of stress due to severe infection, trauma, surgery, or other causes, those who had used glucocorticoids, immunosuppressants, or similar medications within the previous 3 months, and pregnant or lactating women were excluded. A control group comprising 80 individuals undergoing routine health examinations at our hospital during the same period was also included.
Sample collection
All study participants fasted for at least 8–12 h; 5 mL of venous blood was collected first thing in the morning and dispensed into RNase-free EP tubes, centrifuged (3000 × g, 10 min) to separate the serum, and stored at -80 °C for future use.
Cell culture and treatment
The rat pancreatic islet β-cell line INS-1 was cultured in RPMI 1640 medium containing 10% FBS and 1% penicillin-streptomycin. INS-1 cells were cultured in medium containing 25 mM glucose to establish a high-glucose (HG)-induced cellular damage model25. In the untreated group, INS-1 cells were cultured in RPMI 1640 medium (containing 11.1 mM glucose).
Transfection was performed using the transfection kit with miR-3619-5p mimics, miRNA blank control (miR-NC), si-MTA3, and a blank control (si-NC). The miR-3619-5p mimic, miR-3619-5p inhibitor, siRNA and corresponding negative controls were all purchased from RiboBio. miRNA mimic concentration: 50 nM; miRNA inhibitor concentration: 100 nM; siRNA concentration: 50 nM. Subsequent experiments were carried out 48 h after transfection. The relevant sequences are shown in Supplementary Table 1.
Quantitative reverse transcription polymerase chain reaction (RT-qPCR)
TRIzol reagent was used to extract total RNA from serum, while the miRNeasy Mini Kit was used to extract total RNA from cells. For the detection of miR-3619-5p, reverse transcription was performed using a reverse transcription kit; following cDNA synthesis, a miRNA quantification kit was employed, with U6 as the internal control. For the detection of MTA3, reverse transcription to cDNA was performed using an mRNA reverse transcription kit, and RT-qPCR was carried out using an mRNA quantification kit, with GAPDH as the internal control. The changes in the expression of miR-3619-5p and MTA3 were analyzed using the 2-ΔΔCt method. Primer sequences are shown in Supplementary Table 1.
Dual luciferase reporter (DLR) assay
Wild-type (WT) and mutant (MUT) 3'-UTRs of MTA3 containing the miR-3619-5p binding site were cloned into the pmirGLO vector. The vector was co-transfected with the miR-3619-5p mimic and miR-3619-5p inhibitor into 293T cells using transfection reagents. The transfection control groups included: the empty reporter plasmid group (Control) and the miRNA negative control transfection group (miR-NC). After 48 h, relative luciferase activity was measured using a dual-luciferase reporter system, with Renilla luciferase activity serving as an internal control. Each group comprises three independent biological replicates, with each biological replicate consisting of three technical replicates.
Cell proliferation assay
Seed the transfected cells into a 96-well plate. After culturing for 0 h, 24 h, 48 h, and 72 h, respectively, add 10 μL of CCK-8 reagent to each well, incubate at 37 °C for 2 h, and measure the absorbance at 450 nm using a microplate reader.
Apoptosis assay
Wash the cells three times with PBS, then resuspend them in 200 μL of binding buffer containing 10 μL of Annexin V-FITC and 5 μL of PI. Incubate for 15 min at room temperature in the dark. Add 300 μL of binding buffer, then immediately analyze the cells using a flow cytometer to calculate the apoptosis rate.
Enzyme-linked immunosorbent assay (ELISA)
Transfected cells were seeded into a 96-well plate and starved overnight at 37 °C. The culture medium was replaced with a solution containing 25 mM glucose and the cells were cultured for 1 h; the culture medium from the treated INS-1 cells was then collected to measure insulin secretion. The INS-1 cells were resuspended in acidic methanol, sonicated, and the supernatant was collected to determine the total insulin content. The Rat Insulin ELISA Kit was used, and the assay was performed according to the manufacturer’s instructions. The assay utilizes the reference standards supplied with the test kit to construct a calibration curve; the absolute concentration of insulin is calculated based on the absorbance values of the samples, with the unit of absolute concentration being μIU/mL. Finally, insulin secretion capacity was assessed by normalizing the levels of insulin measured in the culture medium against the total intracellular insulin content. The data in the statistical graphs are presented as fold changes, calculated relative to the control group.
Western blot
Transfected cells from each group were harvested, and RIPA lysis buffer was added. The total protein concentration was determined using the BCA method. 50 μg of total protein was mixed with 5× loading buffer and boiled for 10 min. Following 10% SDS-polyacrylamide gel electrophoresis, transfer the proteins to a polyvinylidene fluoride membrane. Block with 5% skimmed milk for 1 h; add the primary antibodies MTA3 (1:1000) and GAPDH (1:1000) and incubate overnight at 4 °C; wash the membrane with TBST, then add the HRP-labeled goat anti-rabbit IgG secondary antibody (1:1000) and incubate at room temperature for 1 h; visualize using the ECL chemiluminescence method.
Statistical analysis
Quantitative data are expressed as mean ± standard deviation. Before conducting statistical analysis, the Shapiro–Wilk test was used to verify the normality of the data, and Levene’s test was used to assess the homogeneity of variances, to determine the suitability of parametric tests. The results of these tests indicated that all quantitative data in this study followed a normal distribution and satisfied the assumption of homogeneity of variances; therefore, parametric tests were employed for statistical analysis. An independent samples t-test was used to analyze data from two groups, while one-way analysis of variance (ANOVA) with Tukey’s post-hoc test was employed for comparisons between multiple groups. Scatter plots were used to assess linear relationships between variables. Pearson correlation analysis was applied, where the assumptions of normality and linearity were met. The Pearson correlation analysis included all 102 participants; no outliers were excluded. The clustering of points observed in the scatter plot is due to the overlap of sample observations. All experiments included three replicate samples, and each experiment was repeated three times. The p-value of <0.05 was considered statistically significant.