Eric A. Miska

Publications

• A Family of Argonaute-Interacting Proteins Gates Nuclear RNAi
  Molecular Cell. Apr, 2020  |   Pubmed ID: 32348780
• Cysteine Synthases CYSL-1 and CYSL-2 Mediate C. Elegans Heritable Adaptation to P. Vranovensis Infection
  Nature Communications. Apr, 2020  |   Pubmed ID: 32269224
• Ancestral Hybridization Facilitated Species Diversification in the Lake Malawi Cichlid Fish Adaptive Radiation
  Molecular Biology and Evolution. Apr, 2020  |   Pubmed ID: 31821500
• Epigenetic Remodelling Licences Adult Cholangiocytes for Organoid Formation and Liver Regeneration
  Nature Cell Biology. 11, 2019  |   Pubmed ID: 31685987
• Publisher Correction: Sequencing Cell-type-specific Transcriptomes with SLAM-ITseq
  Nature Protocols. Aug, 2019  |   Pubmed ID: 31296964
• NSUN2 Introduces 5-methylcytosines in Mammalian Mitochondrial TRNAs
  Nucleic Acids Research. 09, 2019  |   Pubmed ID: 31276587
• Sequencing Cell-type-specific Transcriptomes with SLAM-ITseq
  Nature Protocols. 08, 2019  |   Pubmed ID: 31243395
• Mature Sperm Small-RNA Profile in the Sparrow: Implications for Transgenerational Effects of Age on Fitness
  Environmental Epigenetics. Apr, 2019  |   Pubmed ID: 31139435
• A Secreted RNA Binding Protein Forms RNA-Stabilizing Granules in the Honeybee Royal Jelly
  Molecular Cell. 05, 2019  |   Pubmed ID: 31051140
• Identification of Functional Long Non-coding RNAs in C. Elegans
  BMC Biology. 02, 2019  |   Pubmed ID: 30777050
• Tissue- and Sex-specific Small RNAomes Reveal Sex Differences in Response to the Environment
  PLoS Genetics. 02, 2019  |   Pubmed ID: 30735500
• The USTC Co-opts an Ancient Machinery to Drive PiRNA Transcription in
  Genes & Development. 01, 2019  |   Pubmed ID: 30567997
• Whole-genome Sequences of Malawi Cichlids Reveal Multiple Radiations Interconnected by Gene Flow
  Nature Ecology & Evolution. 12, 2018  |   Pubmed ID: 30455444
• Alterations in Sperm Long RNA Contribute to the Epigenetic Inheritance of the Effects of Postnatal Trauma
  Molecular Psychiatry. Oct, 2018  |   Pubmed ID: 30374190
• COMRADES Determines in Vivo RNA Structures and Interactions
  Nature Methods. 10, 2018  |   Pubmed ID: 30202058
• Terminal Uridylyltransferases Target RNA Viruses As Part of the Innate Immune System
  Nature Structural & Molecular Biology. 09, 2018  |   Pubmed ID: 30104661
• SLAM-ITseq: Sequencing Cell Type-specific Transcriptomes Without Cell Sorting
  Development (Cambridge, England). 07, 2018  |   Pubmed ID: 29945865
• Pan-arthropod Analysis Reveals Somatic PiRNAs As an Ancestral Defence Against Transposable Elements
  Nature Ecology & Evolution. Jan, 2018  |   Pubmed ID: 29203920
• An Alternative STAT Signaling Pathway Acts in Viral Immunity in
  MBio. 09, 2017  |   Pubmed ID: 28874466
• The Helicase Aquarius/EMB-4 Is Required to Overcome Intronic Barriers to Allow Nuclear RNAi Pathways to Heritably Silence Transcription
  Developmental Cell. 08, 2017  |   Pubmed ID: 28787591
• The Profile and Dynamics of RNA Modifications in Animals
  Chembiochem : a European Journal of Chemical Biology. 06, 2017  |   Pubmed ID: 28449301
• A Team of Heterochromatin Factors Collaborates with Small RNA Pathways to Combat Repetitive Elements and Germline Stress
  ELife. 03, 2017  |   Pubmed ID: 28294943
• 2'-O-Methyl-5-hydroxymethylcytidine: A Second Oxidative Derivative of 5-Methylcytidine in RNA
  Journal of the American Chemical Society. 02, 2017  |   Pubmed ID: 28107630
• Selective Inhibitors of Trypanosomal Uridylyl Transferase RET1 Establish Druggability of RNA Post-transcriptional Modifications
  RNA Biology. 05, 2017  |   Pubmed ID: 26786754
• Oral Transfer of Chemical Cues, Growth Proteins and Hormones in Social Insects
  ELife. 11, 2016  |   Pubmed ID: 27894417
• Transgenerational Inheritance: Models and Mechanisms of Non-DNA Sequence-based Inheritance
  Science (New York, N.Y.). 10, 2016  |   Pubmed ID: 27846492
• Identification of Small Molecule Inhibitors of the Lin28-mediated Blockage of Pre-let-7g Processing
  Organic & Biomolecular Chemistry. Nov, 2016  |   Pubmed ID: 27731469
• Wolbachia Blocks Viral Genome Replication Early in Infection Without a Transcriptional Response by the Endosymbiont or Host Small RNA Pathways
  PLoS Pathogens. Apr, 2016  |   Pubmed ID: 27089431
• TRNA Fragments: Novel Players in Intergenerational Inheritance
  Cell Research. Apr, 2016  |   Pubmed ID: 26902286
• Genomic Islands of Speciation Separate Cichlid Ecomorphs in an East African Crater Lake
  Science (New York, N.Y.). Dec, 2015  |   Pubmed ID: 26680190
• Antiviral RNA Interference Against Orsay Virus Is Neither Systemic nor Transgenerational in Caenorhabditis Elegans
  Journal of Virology. Dec, 2015  |   Pubmed ID: 26401037
• E. Coli OxyS Non-coding RNA Does Not Trigger RNAi in C. Elegans
  Scientific Reports. Apr, 2015  |   Pubmed ID: 25873159
• Tertiary SiRNAs Mediate Paramutation in C. Elegans
  PLoS Genetics. Mar, 2015  |   Pubmed ID: 25811365
• Formation and Abundance of 5-hydroxymethylcytosine in RNA
  Chembiochem : a European Journal of Chemical Biology. Mar, 2015  |   Pubmed ID: 25676849
• Caenorhabditis Elegans RSD-2 and RSD-6 Promote Germ Cell Immortality by Maintaining Small Interfering RNA Populations
  Proceedings of the National Academy of Sciences of the United States of America. Oct, 2014  |   Pubmed ID: 25258416
• PiRNAs: from Biogenesis to Function
  Development (Cambridge, England). Sep, 2014  |   Pubmed ID: 25183868
• Considerations when Investigating LncRNA Function in Vivo
  ELife. Aug, 2014  |   Pubmed ID: 25124674
• Small RNAs Break Out: the Molecular Cell Biology of Mobile Small RNAs
  Nature Reviews. Molecular Cell Biology. Aug, 2014  |   Pubmed ID: 25053358
• Getting a Grip on PiRNA Cluster Transcription
  Cell. Jun, 2014  |   Pubmed ID: 24906143
• Reduced Insulin/IGF-1 Signaling Restores Germ Cell Immortality to Caenorhabditis Elegans Piwi Mutants
  Cell Reports. May, 2014  |   Pubmed ID: 24767993
• PRDE-1 is a Nuclear Factor Essential for the Biogenesis of Ruby Motif-dependent PiRNAs in C. Elegans
  Genes & Development. Apr, 2014  |   Pubmed ID: 24696457
• Betaine Acts on a Ligand-gated Ion Channel in the Nervous System of the Nematode C. Elegans
  Nature Neuroscience. Dec, 2013  |   Pubmed ID: 24212673
• Antiviral RNA Interference in Animals: Piecing Together the Evidence
  Nature Structural & Molecular Biology. Nov, 2013  |   Pubmed ID: 24197164
• A Deletion Polymorphism in the Caenorhabditis Elegans RIG-I Homolog Disables Viral RNA Dicing and Antiviral Immunity
  ELife. Oct, 2013  |   Pubmed ID: 24137537
• MiR-210 is Induced by Oct-2, Regulates B Cells, and Inhibits Autoantibody Production
  Journal of Immunology (Baltimore, Md. : 1950). Sep, 2013  |   Pubmed ID: 23960236
• Molecular Biology. Is There Social RNA?
  Science (New York, N.Y.). Aug, 2013  |   Pubmed ID: 23908213
• RNAi Pathways in the Recognition of Foreign RNA: Antiviral Responses and Host-parasite Interactions in Nematodes
  Biochemical Society Transactions. Aug, 2013  |   Pubmed ID: 23863148
• Competition Between Virus-derived and Endogenous Small RNAs Regulates Gene Expression in Caenorhabditis Elegans
  Genome Research. Aug, 2013  |   Pubmed ID: 23811144
• The Shaping and Functional Consequences of the MicroRNA Landscape in Breast Cancer
  Nature. May, 2013  |   Pubmed ID: 23644459
• A Study of Caenorhabditis Elegans DAF-2 Mutants by Metabolomics and Differential Correlation Networks
  Molecular BioSystems. Jul, 2013  |   Pubmed ID: 23475189
• Post-developmental MicroRNA Expression is Required for Normal Physiology, and Regulates Aging in Parallel to Insulin/IGF-1 Signaling in C. Elegans
  RNA (New York, N.Y.). Dec, 2012  |   Pubmed ID: 23097426
• Differential Impact of the HEN1 Homolog HENN-1 on 21U and 26G RNAs in the Germline of Caenorhabditis Elegans
  PLoS Genetics. 2012  |   Pubmed ID: 22829772
• PiRNAs Can Trigger a Multigenerational Epigenetic Memory in the Germline of C. Elegans
  Cell. Jul, 2012  |   Pubmed ID: 22738725
• Function, Targets, and Evolution of Caenorhabditis Elegans PiRNAs
  Science (New York, N.Y.). Aug, 2012  |   Pubmed ID: 22700655
• RIP-chip-SRM--a New Combinatorial Large-scale Approach Identifies a Set of Translationally Regulated Bantam/miR-58 Targets in C. Elegans
  Genome Research. Jul, 2012  |   Pubmed ID: 22454234
• Developmental Characterization of the MicroRNA-specific C. Elegans Argonautes Alg-1 and Alg-2
  PloS One. 2012  |   Pubmed ID: 22448270
• A Metabolomic Strategy Defines the Regulation of Lipid Content and Global Metabolism by Δ9 Desaturases in Caenorhabditis Elegans
  BMC Genomics. Jan, 2012  |   Pubmed ID: 22264337
• MiR-124 Acts Through CoREST to Control Onset of Sema3A Sensitivity in Navigating Retinal Growth Cones
  Nature Neuroscience. Dec, 2011  |   Pubmed ID: 22138647
• A LIN28-dependent Structural Change in Pre-let-7g Directly Inhibits Dicer Processing
  Biochemistry. Sep, 2011  |   Pubmed ID: 21815640
• Natural and Experimental Infection of Caenorhabditis Nematodes by Novel Viruses Related to Nodaviruses
  PLoS Biology. Jan, 2011  |   Pubmed ID: 21283608
• Regulation of Pre-miRNA Processing
  Advances in Experimental Medicine and Biology. 2010  |   Pubmed ID: 21627031
• Genome-wide Identification of Targets and Function of Individual MicroRNAs in Mouse Embryonic Stem Cells
  PLoS Genetics. Oct, 2010  |   Pubmed ID: 20975942
• A Quantitative Targeted Proteomics Approach to Validate Predicted MicroRNA Targets in C. Elegans
  Nature Methods. Oct, 2010  |   Pubmed ID: 20835247
• The MicroRNAs of Caenorhabditis Elegans
  Seminars in Cell & Developmental Biology. Sep, 2010  |   Pubmed ID: 20637886
• The Conserved MiR-51 MicroRNA Family is Redundantly Required for Embryonic Development and Pharynx Attachment in Caenorhabditis Elegans
  Genetics. Jul, 2010  |   Pubmed ID: 20421599
• The MicroRNA MiR-124 Controls Gene Expression in the Sensory Nervous System of Caenorhabditis Elegans
  Nucleic Acids Research. Jun, 2010  |   Pubmed ID: 20176573
• Characterisation of MicroRNA Expression in Post-natal Mouse Mammary Gland Development
  BMC Genomics. Nov, 2009  |   Pubmed ID: 19930549
• LIN-28 and the Poly(U) Polymerase PUP-2 Regulate Let-7 MicroRNA Processing in Caenorhabditis Elegans
  Nature Structural & Molecular Biology. Oct, 2009  |   Pubmed ID: 19713957
• Abundant and Dynamically Expressed MiRNAs, PiRNAs, and Other Small RNAs in the Vertebrate Xenopus Tropicalis
  Genome Research. Oct, 2009  |   Pubmed ID: 19628731
• Two Piwi Proteins, Xiwi and Xili, Are Expressed in the Xenopus Female Germline
  RNA (New York, N.Y.). Feb, 2009  |   Pubmed ID: 19144913
• Piwi and PiRNAs Act Upstream of an Endogenous SiRNA Pathway to Suppress Tc3 Transposon Mobility in the Caenorhabditis Elegans Germline
  Molecular Cell. Jul, 2008  |   Pubmed ID: 18571451
• Functional Genomic, Computational and Proteomic Analysis of C. Elegans MicroRNAs
  Briefings in Functional Genomics & Proteomics. May, 2008  |   Pubmed ID: 18565984
• A Comparative Metabolomic Study of NHR-49 in Caenorhabditis Elegans and PPAR-alpha in the Mouse
  FEBS Letters. May, 2008  |   Pubmed ID: 18435929
• MicroRNA Biogenesis is Required for Mouse Primordial Germ Cell Development and Spermatogenesis
  PloS One. Mar, 2008  |   Pubmed ID: 18320056
• MicroRNA: Implications for Cancer
  Virchows Archiv : an International Journal of Pathology. Jan, 2008  |   Pubmed ID: 18040713
• MicroRNA-155 Regulates the Generation of Immunoglobulin Class-switched Plasma Cells
  Immunity. Dec, 2007  |   Pubmed ID: 18055230
• MicroRNA Expression Profiling of Human Breast Cancer Identifies New Markers of Tumor Subtype
  Genome Biology. 2007  |   Pubmed ID: 17922911
• A Slicer-independent Role for Argonaute 2 in Hematopoiesis and the MicroRNA Pathway
  Genes & Development. Aug, 2007  |   Pubmed ID: 17626790
• MiRNAs in Cancer: Approaches, Aetiology, Diagnostics and Therapy
  Human Molecular Genetics. Apr, 2007  |   Pubmed ID: 17613543
• Requirement of Bic/microRNA-155 for Normal Immune Function
  Science (New York, N.Y.). Apr, 2007  |   Pubmed ID: 17463290
• Caenorhabditis Elegans and Friends in Los Angeles
  Genome Biology. 2005  |   Pubmed ID: 16277759
• MicroRNA Functions in Animal Development and Human Disease
  Development (Cambridge, England). Nov, 2005  |   Pubmed ID: 16224045
• How MicroRNAs Control Cell Division, Differentiation and Death
  Current Opinion in Genetics & Development. Oct, 2005  |   Pubmed ID: 16099643
• Acetylation of Beta-catenin by CREB-binding Protein (CBP)
  The Journal of Biological Chemistry. Jul, 2002  |   Pubmed ID: 11973335
• Differential Localization of HDAC4 Orchestrates Muscle Differentiation
  Nucleic Acids Research. Aug, 2001  |   Pubmed ID: 11504882