Hikmet Budak Chief Science Officer Montana BioAg. Inc. Biography Publications Institution JoVE Articles Hikmet Budak Hikmet Budak received his Ph.D. degree from the University of Nebraska-Lincoln, USA, in 2002. His work has encompassed a wide range of disciplines, accumulating in 25 years of experience across academia and industry worldwide. He is currently working as a Chief Science Officer at Montana BioAg. Inc., USA and also serves as and Adjunct Professor at the University of Nebraska-Lincoln, USA Publications mirMachine: A One-Stop Shop for Plant miRNA AnnotationJournal of Visualized Experiments: Jove. 2021 | Pubmed ID: Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potentialNature genetics. 2021 | Pubmed ID: Multiple wheat genomes reveal global variation in modern breedingNature. 2020 | Pubmed ID: The barley pan-genome reveals the hidden legacy of mutation breedingNature. 2020 | Pubmed ID: Long non-coding RNA in plants in the era of reference sequencesFrontiers in plant science. 2020 | Pubmed ID: Durum wheat genome highlights past domestication signatures and future improvement targetsNature genetics. 2019 | Pubmed ID: Shifting the limits in wheat research and breeding using a fully annotated reference genomeScience. 2018 | Pubmed ID: CRISPR/Cas9 genome editing in wheatFunctional & integrative genomics. 2018 | Pubmed ID: CRISPR/Cas9 in plants: at play in the genome and at work for crop improvementBriefings in functional genomics. 2018 | Pubmed ID: Chromosome-based survey sequencing reveals the genome organization of wild wheat progenitor Triticum dicoccoidesPlant biotechnology journal. 2018 | Pubmed ID: Genome Sequence of the Wheat Stem Sawfly, Cephus cinctus, Representing an Early-Branching Lineage of the Hymenoptera, Illuminates Evolution ofGenome biology and evolution. 2018 | Pubmed ID: Wild emmer genome architecture and diversity elucidate wheat evolution and domesticationScience. 2017 | Pubmed ID: Assembly and annotation of transcriptome provided evidence of miRNA mobility between wheat and wheat stem sawflyFrontiers in plant science. 2017 | Pubmed ID: Plant miRNAs: biogenesis, organization and originsFunctional & integrative genomics. 2015 | Pubmed ID: A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genomeScience. 2014 | Pubmed ID: Proteome changes in wild and modern wheat leaves upon drought stress by two-dimensional electrophoresis and nanoLC-ESI–MS/MSPlant molecular biology. 2013 | Pubmed ID: Sequencing over 13 000 expressed sequence tags from six subtractive cDNA libraries of wild and modern wheats following slow drought stressPlant, cell & environment. 2009 | Pubmed ID: mirMachine: A One-Stop Shop for Plant miRNA Annotation H. Busra Cagirici1, Taner Z. Sen1, Hikmet Budak2 1U.S. Department of Agriculture - Agricultural Research Service, Western Regional Research Center, Crop Improvement and Genetics Research Unit, CA, USA, 2Montana BioAgriculture Inc., Missoula, MT, USA JoVE 62430 Biology
mirMachine: A One-Stop Shop for Plant miRNA Annotation H. Busra Cagirici1, Taner Z. Sen1, Hikmet Budak2 1U.S. Department of Agriculture - Agricultural Research Service, Western Regional Research Center, Crop Improvement and Genetics Research Unit, CA, USA, 2Montana BioAgriculture Inc., Missoula, MT, USA JoVE 62430 Biology
